Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU6-966P-201ENST00000516479 104 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AC087441.2-201ENST00000529141 262 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AP002001.1-203ENST00000534002 267 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 MIR5006-201ENST00000583027 110 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AL121655.1-201ENST00000605811 308 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AC010205.1-201ENST00000616668 449 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AC005562.2-201ENST00000618264 111 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 MIR1248-201ENST00000629190 106 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HOXC4P09017 Y_RNA.176-201ENST00000363815 109 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 Y_RNA.179-201ENST00000363844 90 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNU6-770P-201ENST00000363929 105 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 Y_RNA.193-201ENST00000363979 102 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNU6-280P-201ENST00000364145 104 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 Y_RNA.396-201ENST00000383949 103 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNU6-472P-201ENST00000384299 107 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 SNORA67.2-201ENST00000384300 149 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNU6-463P-201ENST00000384340 107 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 MIR597-201ENST00000384968 97 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 MT-TW-201ENST00000387382 68 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 SNORD78.2-201ENST00000391076 69 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNA5SP501-201ENST00000410990 112 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.43□□□□□ -2.18
HOXC4P09017 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 AC009474.2-201ENST00000451383 136 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 AC108729.3-201ENST00000513484 108 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 SNORA40.9-201ENST00000515895 93 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNU6-1198P-201ENST00000516904 67 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 RNU1-117P-201ENST00000517041 158 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 AC091144.1-201ENST00000519573 138 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.43□□□□□ -2.18
HOXC4P09017 AC103810.8-201ENST00000607347 118 ntBASIC1.43□□□□□ -2.18
HOXC4P09017 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
HOXC4P09017 RNU6-545P-201ENST00000362681 104 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 snoU2_19.2-201ENST00000363024 80 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 RNU6-626P-201ENST00000363354 107 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 Y_RNA.149-201ENST00000363558 117 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 Y_RNA.183-201ENST00000363882 113 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 RNU6-743P-201ENST00000364151 106 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 SNORA63.7-201ENST00000365579 123 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 Y_RNA.439-201ENST00000384119 94 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 RNU6-793P-201ENST00000384233 104 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 RNU6-196P-201ENST00000384315 107 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 RNU6-102P-201ENST00000384485 104 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 Y_RNA.526-201ENST00000384572 110 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC4P09017 HSPE1P21-201ENST00000438283 308 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 AC007395.1-201ENST00000451333 677 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 PCNPP5-201ENST00000452246 481 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.42□□□□□ -2.18
HOXC4P09017 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.42□□□□□ -2.18
HOXC4P09017 AC093259.1-201ENST00000509755 300 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC4P09017 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 Y_RNA.683-201ENST00000516508 93 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXC4P09017 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.42□□□□□ -2.18
HOXC4P09017 SNRPGP20-201ENST00000604477 205 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 TCL6_2.1-201ENST00000615162 119 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 7SK.10-201ENST00000621414 298 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 AC130454.1-201ENST00000622948 401 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
HOXC4P09017 Y_RNA.152-201ENST00000363578 100 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 Y_RNA.286-201ENST00000364813 102 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 Y_RNA.376-201ENST00000365638 108 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 RNU6-245P-201ENST00000384020 107 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 RNU6-20P-201ENST00000384106 107 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 Y_RNA.483-201ENST00000384380 101 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 SNORD115-46-201ENST00000390982 71 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 MRPL35P1-201ENST00000404272 572 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 RNU4-30P-201ENST00000410245 143 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXC4P09017 AC005002.2-201ENST00000438228 269 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC4P09017 AL731563.1-201ENST00000442202 214 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AL357134.1-201ENST00000445848 426 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AC009237.7-201ENST00000447357 229 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC4P09017 AC025465.3-201ENST00000510570 311 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 SNORA40.15-201ENST00000516884 107 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 RNU6-570P-201ENST00000517051 105 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXC4P09017 AP003733.2-201ENST00000529409 171 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC4P09017 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXC4P09017 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 MIR4300-201ENST00000581016 96 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
HOXC4P09017 Y_RNA.772-201ENST00000606692 102 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms