Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 Y_RNA.498-201ENST00000384460 102 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 Y_RNA.526-201ENST00000384572 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 MIR606-201ENST00000384851 96 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RNA5SP100-201ENST00000410903 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RNA5SP59-201ENST00000410922 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RNU6-130P-201ENST00000411112 103 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.89□□□□□ -2.11
CSPG5O95196 RAB28P5-201ENST00000427490 651 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RPEP5-201ENST00000441137 268 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RNU6-397P-201ENST00000516226 104 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RNU6-1146P-201ENST00000516282 102 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 Y_RNA.715-201ENST00000517082 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 CYCSP23-201ENST00000519781 313 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 AP002001.1-203ENST00000534002 267 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 AC113195.1-201ENST00000579952 141 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 AC006504.6-201ENST00000590142 199 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 MIR502-201ENST00000606349 86 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 AL021879.1-201ENST00000611756 288 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CSPG5O95196 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.88□□□□□ -2.11
CSPG5O95196 Y_RNA.122-201ENST00000363331 96 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 RNU6-1160P-201ENST00000384546 104 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CSPG5O95196 AC009310.1-201ENST00000414414 451 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 AC074133.1-201ENST00000515696 183 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 RNA5SP445-201ENST00000515889 115 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 RNU6-764P-201ENST00000516396 105 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 Y_RNA.721-201ENST00000517207 102 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 AC022616.4-201ENST00000522985 181 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.88□□□□□ -2.11
CSPG5O95196 CBX3P4-201ENST00000538909 354 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 AC055872.1-201ENST00000570978 278 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 AL121655.1-201ENST00000605811 308 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.88□□□□□ -2.11
CSPG5O95196 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
CSPG5O95196 SNORA63C-201ENST00000364578 129 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RNU6-1264P-201ENST00000383891 107 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 Y_RNA.422-201ENST00000384054 114 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RNA5SP323-201ENST00000391094 133 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 MRPL35P1-201ENST00000404272 572 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 MIR1252-201ENST00000408861 65 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RNU6-985P-201ENST00000410182 104 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 AC060773.1-201ENST00000421698 310 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
CSPG5O95196 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RNU7-95P-201ENST00000459222 64 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 U8.20-201ENST00000459445 131 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 AC010409.1-201ENST00000487382 476 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RPL36AP21-201ENST00000490372 323 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CSPG5O95196 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.87□□□□□ -2.11
CSPG5O95196 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RAC1P9-201ENST00000604990 392 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 AC022513.1-201ENST00000624512 117 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 snoZ196.1-201ENST00000625269 89 ntBASIC1.87□□□□□ -2.11
CSPG5O95196 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.87□□□□□ -2.11
CSPG5O95196 Y_RNA.153-201ENST00000363615 91 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 RNU6-414P-201ENST00000363705 104 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 RNU6-20P-201ENST00000384106 107 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 MIR1185-2-201ENST00000408687 86 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.86□□□□□ -2.11
CSPG5O95196 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 AL360085.1-201ENST00000604713 532 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 AC010205.1-201ENST00000616668 449 ntBASIC1.86□□□□□ -2.11
CSPG5O95196 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSPG5O95196 RNU6-1266P-201ENST00000362794 105 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 RNY1P10-201ENST00000363268 113 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 RNU6-626P-201ENST00000363354 107 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 Y_RNA.143-201ENST00000363520 106 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 Y_RNA.439-201ENST00000384119 94 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 Y_RNA.551-201ENST00000384661 102 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 MIR489-201ENST00000384923 84 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSPG5O95196 AC008134.1-201ENST00000420943 193 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 TOMM22P2-201ENST00000430735 237 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.85□□□□□ -2.11
CSPG5O95196 AL118496.2-201ENST00000448300 230 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 NDUFB4P10-201ENST00000452541 359 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 RNU6-1046P-201ENST00000516538 107 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 AC131281.1-201ENST00000522984 164 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.85□□□□□ -2.11
CSPG5O95196 AL645939.4-201ENST00000604495 135 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 Y_RNA.772-201ENST00000606692 102 ntBASIC1.85□□□□□ -2.11
CSPG5O95196 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms