Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 RNU6-389P-201ENST00000517048 105 ntBASIC2□□□□□ -2.09
ITM2AO43736 SUMO2P18-201ENST00000518873 252 ntBASIC2□□□□□ -2.09
ITM2AO43736 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2□□□□□ -2.09
ITM2AO43736 AC026271.5-201ENST00000577873 130 ntBASIC2□□□□□ -2.09
ITM2AO43736 MIR3684-201ENST00000579779 74 ntBASIC2□□□□□ -2.09
ITM2AO43736 AL031274.2-201ENST00000599419 203 ntBASIC2□□□□□ -2.09
ITM2AO43736 MIR6798-201ENST00000612887 67 ntBASIC2□□□□□ -2.09
ITM2AO43736 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2□□□□□ -2.09
ITM2AO43736 AC068700.1-201ENST00000565862 3754 ntBASIC2□□□□□ -2.09
ITM2AO43736 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
ITM2AO43736 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
ITM2AO43736 AL365361.1-201ENST00000566942 3481 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ITM2AO43736 SNORD114-7-201ENST00000362520 77 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 Y_RNA.76-201ENST00000362931 109 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 SNORA33-201ENST00000363664 130 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 SNORA3A-201ENST00000364113 130 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 Y_RNA.275-201ENST00000364726 110 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 RNU1-52P-201ENST00000384190 164 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 MIR548H3-201ENST00000408771 118 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.99□□□□□ -2.09
ITM2AO43736 AL353689.1-201ENST00000438895 199 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ITM2AO43736 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 AC005357.1-201ENST00000588399 301 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 AC078938.1-201ENST00000620993 318 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
ITM2AO43736 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ITM2AO43736 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
ITM2AO43736 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ITM2AO43736 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.98□□□□□ -2.09
ITM2AO43736 Y_RNA.54-201ENST00000362766 105 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 SNORA20.1-201ENST00000364790 130 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 Y_RNA.310-201ENST00000365063 113 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 RNU6-117P-201ENST00000365415 107 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 RNU6-338P-201ENST00000383888 105 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 Y_RNA.476-201ENST00000384347 108 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 Y_RNA.478-201ENST00000384358 107 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 SNORD116-13-201ENST00000384408 92 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 SUMO1P2-201ENST00000452524 304 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
ITM2AO43736 Y_RNA.637-201ENST00000459424 114 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 RPS26P55-201ENST00000471178 356 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.98□□□□□ -2.09
ITM2AO43736 RNA5SP20-201ENST00000515976 84 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 RNU7-128P-201ENST00000517247 62 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 IGKV3-31-201ENST00000523109 329 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
ITM2AO43736 AC006435.5-201ENST00000624486 112 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 U6.108-201ENST00000637764 58 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ITM2AO43736 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ITM2AO43736 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
ITM2AO43736 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
ITM2AO43736 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ITM2AO43736 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
ITM2AO43736 AL356292.1-201ENST00000283110 373 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 RNU1-58P-201ENST00000362413 163 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 snoU2-30.2-201ENST00000362805 70 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 RNU6-407P-201ENST00000365280 104 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 Y_RNA.368-201ENST00000365547 113 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 Y_RNA.489-201ENST00000384410 101 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 RNU6-1289P-201ENST00000384431 106 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 MIR518A2-201ENST00000384966 87 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
ITM2AO43736 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.97□□□□□ -2.09
ITM2AO43736 AL139109.1-201ENST00000455491 297 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.97□□□□□ -2.09
ITM2AO43736 AL049873.1-201ENST00000480540 376 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 RNU6-1337P-201ENST00000516525 95 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 RNU6-63P-201ENST00000516690 95 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.97□□□□□ -2.09
ITM2AO43736 MIR4282-201ENST00000583613 67 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 AC011921.3-201ENST00000605540 361 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 AC037487.3-201ENST00000606668 112 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 AC090425.1-201ENST00000610007 140 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 U6.73-201ENST00000619194 103 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.97□□□□□ -2.09
ITM2AO43736 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
ITM2AO43736 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 Y_RNA.122-201ENST00000363331 96 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 RNU1-22P-201ENST00000363334 158 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 RNU6-1048P-201ENST00000364054 107 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 RNU1-96P-201ENST00000364163 162 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 Y_RNA.269-201ENST00000364685 89 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 RNU6-514P-201ENST00000384208 107 ntBASIC1.96□□□□□ -2.1
ITM2AO43736 MIR597-201ENST00000384968 97 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms