Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 ZNF72P-201ENST00000425869 1908 ntBASIC1.62□□□□□ -2.15
Q9N2K0 SNORA27.1-201ENST00000362604 124 ntBASIC1.62□□□□□ -2.15
Q9N2K0 SNORA33-201ENST00000363664 130 ntBASIC1.62□□□□□ -2.15
Q9N2K0 RNU6-20P-201ENST00000384106 107 ntBASIC1.62□□□□□ -2.15
Q9N2K0 SNORA67.3-201ENST00000384366 140 ntBASIC1.62□□□□□ -2.15
Q9N2K0 SNORA64-201ENST00000384674 134 ntBASIC1.62□□□□□ -2.15
Q9N2K0 MIR562-201ENST00000384894 95 ntBASIC1.62□□□□□ -2.15
Q9N2K0 AL355796.1-201ENST00000406706 323 ntBASIC1.62□□□□□ -2.15
Q9N2K0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.62□□□□□ -2.15
Q9N2K0 AL445646.1-201ENST00000431784 216 ntBASIC1.62□□□□□ -2.15
Q9N2K0 AL121890.1-201ENST00000435457 205 ntBASIC1.62□□□□□ -2.15
Q9N2K0 RPL23AP63-201ENST00000498752 471 ntBASIC1.62□□□□□ -2.15
Q9N2K0 AC097462.1-201ENST00000514125 324 ntBASIC1.62□□□□□ -2.15
Q9N2K0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.62□□□□□ -2.15
Q9N2K0 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
Q9N2K0 MIR1273D-201ENST00000577266 86 ntBASIC1.62□□□□□ -2.15
Q9N2K0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Q9N2K0 AL356292.1-201ENST00000283110 373 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNU6-626P-201ENST00000363354 107 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
Q9N2K0 SNORA63.7-201ENST00000365579 123 ntBASIC1.61□□□□□ -2.15
Q9N2K0 SNORD14.1-201ENST00000365609 90 ntBASIC1.61□□□□□ -2.15
Q9N2K0 AC117470.1-201ENST00000381974 330 ntBASIC1.61□□□□□ -2.15
Q9N2K0 Y_RNA.424-201ENST00000384063 103 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNU6-708P-201ENST00000384217 107 ntBASIC1.61□□□□□ -2.15
Q9N2K0 Y_RNA.462-201ENST00000384268 102 ntBASIC1.61□□□□□ -2.15
Q9N2K0 MIR30A-201ENST00000385092 71 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNU2-54P-201ENST00000410299 190 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.61□□□□□ -2.15
Q9N2K0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.61□□□□□ -2.15
Q9N2K0 snoU13.27-201ENST00000459278 104 ntBASIC1.61□□□□□ -2.15
Q9N2K0 U8.20-201ENST00000459445 131 ntBASIC1.61□□□□□ -2.15
Q9N2K0 AL163540.1-201ENST00000485382 386 ntBASIC1.61□□□□□ -2.15
Q9N2K0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.61□□□□□ -2.15
Q9N2K0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.61□□□□□ -2.15
Q9N2K0 RNA5SP20-201ENST00000515976 84 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNU7-128P-201ENST00000517247 62 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RNA5SP437-201ENST00000517249 129 ntBASIC1.61□□□□□ -2.15
Q9N2K0 RPL21P9-201ENST00000556149 474 ntBASIC1.61□□□□□ -2.15
Q9N2K0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.61□□□□□ -2.15
Q9N2K0 AC007485.1-201ENST00000616755 206 ntBASIC1.61□□□□□ -2.15
Q9N2K0 U6.108-201ENST00000637764 58 ntBASIC1.61□□□□□ -2.15
Q9N2K0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Q9N2K0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.6□□□□□ -2.15
Q9N2K0 Y_RNA.28-201ENST00000362554 111 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
Q9N2K0 Y_RNA.813-201ENST00000364639 102 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU6-407P-201ENST00000365280 104 ntBASIC1.6□□□□□ -2.15
Q9N2K0 Y_RNA.361-201ENST00000365515 120 ntBASIC1.6□□□□□ -2.15
Q9N2K0 Y_RNA.458-201ENST00000384240 102 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.6□□□□□ -2.15
Q9N2K0 MIR548P-201ENST00000408336 84 ntBASIC1.6□□□□□ -2.15
Q9N2K0 COX6CP10-201ENST00000416832 224 ntBASIC1.6□□□□□ -2.15
Q9N2K0 Z98742.3-201ENST00000418637 326 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
Q9N2K0 PMCHL1-202ENST00000423102 261 ntBASIC1.6□□□□□ -2.15
Q9N2K0 MTCO2P12-201ENST00000427426 682 ntBASIC1.6□□□□□ -2.15
Q9N2K0 AC073910.1-201ENST00000445047 438 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RPS29P21-201ENST00000496272 170 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU1-41P-201ENST00000516161 162 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU1-48P-201ENST00000516400 162 ntBASIC1.6□□□□□ -2.15
Q9N2K0 RNU7-172P-201ENST00000517125 64 ntBASIC1.6□□□□□ -2.15
Q9N2K0 Y_RNA.721-201ENST00000517207 102 ntBASIC1.6□□□□□ -2.15
Q9N2K0 AC027419.1-201ENST00000522976 328 ntBASIC1.6□□□□□ -2.15
Q9N2K0 AC040926.1-201ENST00000530195 238 ntBASIC1.6□□□□□ -2.15
Q9N2K0 AC023157.2-201ENST00000540596 141 ntBASIC1.6□□□□□ -2.15
Q9N2K0 SNRPGP19-201ENST00000603826 189 ntBASIC1.6□□□□□ -2.15
Q9N2K0 MIR8074-201ENST00000615081 81 ntBASIC1.6□□□□□ -2.15
Q9N2K0 AC011476.5-201ENST00000615594 130 ntBASIC1.6□□□□□ -2.15
Q9N2K0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
Q9N2K0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Q9N2K0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.15
Q9N2K0 SNORD115-30-201ENST00000364117 82 ntBASIC1.59□□□□□ -2.15
Q9N2K0 Y_RNA.439-201ENST00000384119 94 ntBASIC1.59□□□□□ -2.15
Q9N2K0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Q9N2K0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.59□□□□□ -2.15
Q9N2K0 RNU2-2P-201ENST00000410396 191 ntBASIC1.59□□□□□ -2.15
Q9N2K0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.59□□□□□ -2.15
Q9N2K0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.59□□□□□ -2.15
Q9N2K0 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
Q9N2K0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.59□□□□□ -2.15
Q9N2K0 AC022616.4-201ENST00000522985 181 ntBASIC1.59□□□□□ -2.15
Q9N2K0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
Q9N2K0 AC018630.2-201ENST00000534866 2403 ntBASIC1.58□□□□□ -2.16
Q9N2K0 ZNF355P-201ENST00000427301 3216 ntBASIC1.58□□□□□ -2.16
Q9N2K0 RNU6-474P-201ENST00000384243 107 ntBASIC1.58□□□□□ -2.16
Q9N2K0 Y_RNA.570-201ENST00000384750 101 ntBASIC1.58□□□□□ -2.16
Q9N2K0 MRPL42P3-201ENST00000401492 326 ntBASIC1.58□□□□□ -2.16
Q9N2K0 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
Q9N2K0 RNA5SP425-201ENST00000410336 112 ntBASIC1.58□□□□□ -2.16
Q9N2K0 RNU2-20P-201ENST00000410425 191 ntBASIC1.58□□□□□ -2.16
Q9N2K0 RPL23AP36-201ENST00000413895 458 ntBASIC1.58□□□□□ -2.16
Q9N2K0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.58□□□□□ -2.16
Q9N2K0 AC005002.2-201ENST00000438228 269 ntBASIC1.58□□□□□ -2.16
Q9N2K0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Q9N2K0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
Q9N2K0 JTBP1-201ENST00000441314 247 ntBASIC1.58□□□□□ -2.16
Q9N2K0 HSPE1P13-201ENST00000451143 297 ntBASIC1.58□□□□□ -2.16
Q9N2K0 RPS26P55-201ENST00000471178 356 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms