Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 ZNF702P-202ENST00000434269 1966 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 RNU4-41P-201ENST00000364426 143 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 SNORA9-201ENST00000384215 133 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 SNORA20-201ENST00000384662 132 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 RNU6-136P-201ENST00000384663 107 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 RNA5SP496-201ENST00000391240 109 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 AL512604.1-201ENST00000404812 257 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 RN7SKP101-201ENST00000411376 320 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 SNORA74D-201ENST00000516404 141 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 RN7SKP282-201ENST00000516824 299 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 SNORA48.11-201ENST00000517015 89 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 MIR4438-201ENST00000585271 93 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 AL356280.1-201ENST00000603614 379 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 AC004832.5-201ENST00000608677 401 ntBASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
PTCHD1Q96NR3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RNA5SP383-201ENST00000362934 120 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RNU1-22P-201ENST00000363334 158 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 SNORD45.3-201ENST00000363836 72 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 SNORA72-201ENST00000384339 132 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 SNORA22C-201ENST00000384614 134 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RNU6-768P-201ENST00000384683 107 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RPL32P35-201ENST00000415214 394 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 AC123900.1-201ENST00000420390 96 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 AC025750.2-201ENST00000442609 450 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RPS27P1-201ENST00000450552 247 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 AC093259.1-201ENST00000509755 300 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 SNORA4.4-201ENST00000515921 135 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RNA5SP217-201ENST00000515959 91 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 RNU6-991P-201ENST00000516168 107 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 MIR3646-201ENST00000578301 84 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 MIR6844-201ENST00000637122 62 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
PTCHD1Q96NR3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 RN7SKP220-201ENST00000410611 288 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 RNU2-63P-201ENST00000410792 194 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 SNRPGP8-201ENST00000454064 226 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 AC097462.1-201ENST00000514125 324 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 RNU6-971P-201ENST00000516920 106 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 MIR3200-201ENST00000580767 85 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 AL031274.2-201ENST00000599419 203 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 AL162274.2-201ENST00000614406 332 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
PTCHD1Q96NR3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 MIR422A-201ENST00000362286 90 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 SNORA79-201ENST00000408376 140 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 RNU2-48P-201ENST00000410694 191 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AC008267.6-201ENST00000441664 139 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 RNU7-197P-201ENST00000458836 62 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 RNU6-856P-201ENST00000516959 98 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 RNU7-172P-201ENST00000517125 64 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AL929325.1-201ENST00000603096 117 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AL355297.2-201ENST00000604792 129 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AL021707.8-201ENST00000609428 183 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 AC091953.5-201ENST00000622919 233 ntBASIC2.91□□□□□ -1.94
PTCHD1Q96NR3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
PTCHD1Q96NR3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 SNORD50B-201ENST00000364995 70 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 MIR1253-201ENST00000408273 105 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 RNU6-735P-201ENST00000410612 107 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 AP001486.1-201ENST00000463339 476 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 AC008885.1-201ENST00000514930 301 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 RNA5SP341-201ENST00000516261 117 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 MIR3117-201ENST00000584034 78 ntBASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTCHD1Q96NR3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.89□□□□□ -1.95
PTCHD1Q96NR3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PTCHD1Q96NR3 MIR22-201ENST00000362190 85 ntBASIC2.89□□□□□ -1.95
PTCHD1Q96NR3 MIR148B-201ENST00000362252 99 ntBASIC2.89□□□□□ -1.95
PTCHD1Q96NR3 SNORA71.1-201ENST00000364523 117 ntBASIC2.89□□□□□ -1.95
PTCHD1Q96NR3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 272.8 ms