Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.12□□□□□ -2.39
UBBP0CG47 Z94722.1-201ENST00000604328 474 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 AC092807.2-201ENST00000609367 243 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 AL354950.2-201ENST00000617939 290 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 AC007494.3-201ENST00000624660 743 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 AC073544.1-201ENST00000600110 1595 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 AC121333.1-201ENST00000567488 2709 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 Y_RNA.184-201ENST00000363884 108 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 RNU6-522P-201ENST00000364497 107 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 RNU5A-6P-201ENST00000384136 116 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.11□□□□□ -2.39
UBBP0CG47 AL137792.2-201ENST00000443484 235 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 MTCO3P10-201ENST00000455912 772 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.11□□□□□ -2.39
UBBP0CG47 AC010999.1-201ENST00000611856 324 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 MIR8070-201ENST00000616510 88 ntBASIC0.11□□□□□ -2.39
UBBP0CG47 MIR103A1-201ENST00000362165 78 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNA5SP48-201ENST00000363969 126 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNU5A-2P-201ENST00000384337 116 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 MIR452-201ENST00000385020 85 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AL590002.1-201ENST00000406554 418 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 MIR1298-201ENST00000408783 112 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNU6-1304P-201ENST00000411374 106 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AL365203.2-201ENST00000423444 196 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AL606489.2-201ENST00000433886 234 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
UBBP0CG47 AL445567.1-201ENST00000439121 144 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 MTCO2P30-201ENST00000503662 364 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNA5SP20-201ENST00000515976 84 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNU11-2P-201ENST00000516898 142 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNU6-1198P-201ENST00000516904 67 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 RNU6-1223P-201ENST00000517124 104 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.1□□□□□ -2.39
UBBP0CG47 MIR4762-201ENST00000585261 75 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AC005828.6-201ENST00000606610 232 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AL136317.1-201ENST00000612653 226 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AC072046.2-201ENST00000618366 268 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.1□□□□□ -2.39
UBBP0CG47 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 AL589743.1-201ENST00000551932 2712 ntBASIC0.1□□□□□ -2.39
UBBP0CG47 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
UBBP0CG47 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
UBBP0CG47 SNORD113.3-201ENST00000364630 78 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 SNORA25.9-201ENST00000365087 128 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 AC117470.1-201ENST00000381974 330 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 MIR936-201ENST00000401264 98 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 RNA5SP247-201ENST00000411181 105 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 PIGPP3-201ENST00000425307 415 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 AC114811.1-201ENST00000507207 168 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.09□□□□□ -2.4
UBBP0CG47 RPL21P9-201ENST00000556149 474 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.09□□□□□ -2.4
UBBP0CG47 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.09□□□□□ -2.4
UBBP0CG47 MIR4764-201ENST00000580680 88 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 AC027449.1-201ENST00000608890 407 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 AC006504.8-201ENST00000621046 635 ntBASIC0.09□□□□□ -2.4
UBBP0CG47 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.09□□□□□ -2.4
UBBP0CG47 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
UBBP0CG47 Y_RNA.179-201ENST00000363844 90 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 RNU6-214P-201ENST00000384130 107 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
UBBP0CG47 EIF4E2P1-201ENST00000393781 255 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 RNA5SP95-201ENST00000410319 137 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 PCNPP5-201ENST00000452246 481 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 AC067940.1-201ENST00000458411 300 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 RNU6-1332P-201ENST00000516666 104 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 RNU6-1096P-201ENST00000517089 102 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 POLR3GP2-201ENST00000588366 668 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 AL050303.3-201ENST00000613704 284 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 RMST_2.1-201ENST00000617263 136 ntBASIC0.08□□□□□ -2.4
UBBP0CG47 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
UBBP0CG47 MIR18A-201ENST00000362310 71 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 SNORD44.1-201ENST00000363202 61 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 Y_RNA.361-201ENST00000365515 120 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 RNU6-376P-201ENST00000384731 106 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 MIR520C-201ENST00000385005 87 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 MIR520G-201ENST00000385064 90 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 RNU6-613P-201ENST00000410412 108 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 RNU6-994P-201ENST00000410507 111 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 RPL30P16-201ENST00000419341 429 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.07□□□□□ -2.4
UBBP0CG47 AC046134.1-201ENST00000514454 666 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.07□□□□□ -2.4
UBBP0CG47 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.07□□□□□ -2.4
UBBP0CG47 MTATP6P24-201ENST00000576835 677 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 MIR4528-201ENST00000577763 90 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 MIR5696-201ENST00000578474 85 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 AC073534.2-201ENST00000620377 381 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 AC078938.1-201ENST00000620993 318 ntBASIC0.07□□□□□ -2.4
UBBP0CG47 Y_RNA.151-201ENST00000363566 112 ntBASIC0.06□□□□□ -2.4
UBBP0CG47 Y_RNA.168-201ENST00000363740 102 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms