Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Y_RNA.27-201ENST00000362540 103 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 Y_RNA.47-201ENST00000362697 108 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 U3.9-201ENST00000363823 204 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RNU4-13P-201ENST00000364019 141 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 SNORA18.2-201ENST00000383865 132 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RNU6-1145P-201ENST00000384246 107 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 Y_RNA.551-201ENST00000384661 102 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RNU6-1109P-201ENST00000391187 107 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RNU6-121P-201ENST00000410525 99 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 MTCO3P19-201ENST00000415864 321 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC4P09017 CBX3P6-201ENST00000430257 527 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 AC091179.3-201ENST00000474761 144 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 AC098869.1-201ENST00000481627 292 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 AC093852.1-201ENST00000503587 266 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXC4P09017 RNU6-567P-201ENST00000516746 107 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RRN3P3-201ENST00000549207 578 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC4P09017 MIR4659A-201ENST00000580269 81 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 MIR4503-201ENST00000582187 83 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RPS29P30-201ENST00000600975 111 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 AC240442.1-201ENST00000616055 283 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 AL138825.1-201ENST00000618587 192 ntBASIC1.47□□□□□ -2.17
HOXC4P09017 RNU1-76P-201ENST00000362903 159 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 Y_RNA.99-201ENST00000363138 105 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 RNU6-727P-201ENST00000363592 107 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 RNU6-961P-201ENST00000363893 105 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 SNORD32B-201ENST00000364460 84 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 RNU4-56P-201ENST00000364700 142 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 Y_RNA.380-201ENST00000365663 111 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 SNORD12B-201ENST00000410433 91 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 AC004386.2-201ENST00000441858 148 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 DYNLT3P2-201ENST00000442517 295 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.46□□□□□ -2.18
HOXC4P09017 RPL26P26-201ENST00000480251 434 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 AC067942.3-201ENST00000512025 362 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 MTCO2P24-201ENST00000515611 426 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXC4P09017 AC136932.1-201ENST00000574771 208 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 AL390123.1-201ENST00000603216 237 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 AL355297.3-201ENST00000604082 446 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
HOXC4P09017 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
HOXC4P09017 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HOXC4P09017 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 Y_RNA.143-201ENST00000363520 106 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 Y_RNA.144-201ENST00000363521 113 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNU6-137P-201ENST00000363680 108 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNU4-50P-201ENST00000364361 141 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 Y_RNA.574-201ENST00000384766 95 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 MIR215-201ENST00000384858 110 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNA5SP504-201ENST00000410676 117 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RPL23AP36-201ENST00000413895 458 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AC009310.1-201ENST00000414414 451 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RPL21P38-201ENST00000418090 167 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 MTCYBP9-201ENST00000431021 303 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 FCF1P4-201ENST00000448326 183 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNA5SP57-201ENST00000459463 123 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNY3P15-201ENST00000516297 97 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RN7SKP49-201ENST00000516675 260 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNU6-965P-201ENST00000516721 96 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNU6-1098P-201ENST00000516772 96 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 RNA5SP54-201ENST00000516951 92 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 MIR2355-201ENST00000517199 87 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AP005660.1-201ENST00000522972 293 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AK6P2-201ENST00000549020 471 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AL161670.1-201ENST00000554348 137 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.45□□□□□ -2.18
HOXC4P09017 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AC055872.1-201ENST00000570978 278 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 AC010999.1-201ENST00000611856 324 ntBASIC1.45□□□□□ -2.18
HOXC4P09017 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.45□□□□□ -2.18
HOXC4P09017 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.45□□□□□ -2.18
HOXC4P09017 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HOXC4P09017 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
HOXC4P09017 MTND5P35-201ENST00000557537 1720 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HOXC4P09017 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.44□□□□□ -2.18
HOXC4P09017 Y_RNA.19-201ENST00000362462 99 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 SNORD87-201ENST00000364849 89 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 Y_RNA.338-201ENST00000365320 114 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 Y_RNA.415-201ENST00000384012 112 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 RNU6-937P-201ENST00000384325 106 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 RNU6-505P-201ENST00000384427 107 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 ELOCP21-201ENST00000412558 336 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.44□□□□□ -2.18
HOXC4P09017 SDAD1P3-201ENST00000427380 333 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.44□□□□□ -2.18
HOXC4P09017 AC073910.1-201ENST00000445047 438 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 LINC01399-202ENST00000458450 244 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 ATP5EP1-201ENST00000510257 156 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
HOXC4P09017 RNU6-408P-201ENST00000515910 100 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms