Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 Y_RNA.27-201ENST00000362540 103 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 Y_RNA.424-201ENST00000384063 103 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.94□□□□□ -2.1
CSPG5O95196 UQCRBP2-201ENST00000447827 297 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.94□□□□□ -2.1
CSPG5O95196 MIR4680-201ENST00000580906 66 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 AC022432.1-201ENST00000595739 310 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 AC069114.2-201ENST00000604699 304 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 Y_RNA.812-201ENST00000610788 101 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 Y_RNA.784-201ENST00000613803 101 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 Y_RNA.787-201ENST00000616522 101 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 Y_RNA.780-201ENST00000617336 101 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 Y_RNA.801-201ENST00000619005 101 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 AC006001.4-201ENST00000622243 395 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 AC008873.1-201ENST00000625051 138 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 AC068205.3-201ENST00000636385 468 ntBASIC1.94□□□□□ -2.1
CSPG5O95196 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSPG5O95196 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CSPG5O95196 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.94□□□□□ -2.1
CSPG5O95196 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CSPG5O95196 MIR340-201ENST00000362125 95 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 Y_RNA.158-201ENST00000363651 101 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 SNORA25.9-201ENST00000365087 128 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 SNORD14.1-201ENST00000365609 90 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 Y_RNA.389-201ENST00000383924 113 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 SNORD78.2-201ENST00000391076 69 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 AL590004.1-201ENST00000405321 300 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 RNU6-57P-201ENST00000411348 103 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 AP1B1P2-201ENST00000416196 106 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 MTCO1P44-201ENST00000441935 243 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 AC245517.4-201ENST00000448601 281 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.93□□□□□ -2.1
CSPG5O95196 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 SNORA40.9-201ENST00000515895 93 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 RNU6-1012P-201ENST00000516606 109 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 RNU6-107P-201ENST00000516643 102 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.93□□□□□ -2.1
CSPG5O95196 DNAJC19P9-201ENST00000555084 351 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 RPS29P30-201ENST00000600975 111 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.93□□□□□ -2.1
CSPG5O95196 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CSPG5O95196 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
CSPG5O95196 RNU6-862P-201ENST00000362804 105 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 Y_RNA.224-201ENST00000364308 111 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 Y_RNA.355-201ENST00000365462 98 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 RNU6-639P-201ENST00000384074 107 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 MIR586-201ENST00000385035 97 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 MIR548B-201ENST00000385247 97 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 RNU6-823P-201ENST00000391042 103 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 ELOCP21-201ENST00000412558 336 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.92□□□□□ -2.1
CSPG5O95196 PCNPP5-201ENST00000452246 481 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 RNU2-34P-201ENST00000516534 121 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 AL442663.2-201ENST00000554385 511 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 MIR4659A-201ENST00000580269 81 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
CSPG5O95196 AC124312.5-201ENST00000604451 268 ntBASIC1.92□□□□□ -2.1
CSPG5O95196 RNU6-961P-201ENST00000363893 105 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 MIR499A-201ENST00000384903 122 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 AC113618.1-201ENST00000416747 285 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 EBAG9P1-201ENST00000418955 543 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 FCF1P4-201ENST00000448326 183 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 RNU6-625P-201ENST00000459412 107 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 RNU7-57P-201ENST00000459540 60 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 AC067942.3-201ENST00000512025 362 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 RNU6-408P-201ENST00000515910 100 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 SCARNA15.1-201ENST00000516384 125 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 RNU6-856P-201ENST00000516959 98 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 AC018448.1-201ENST00000552843 316 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.91□□□□□ -2.1
CSPG5O95196 AL390123.1-201ENST00000603216 237 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 AC240442.1-201ENST00000616055 283 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
CSPG5O95196 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CSPG5O95196 AC117470.1-201ENST00000381974 330 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 Y_RNA.458-201ENST00000384240 102 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 RNU6-975P-201ENST00000384296 105 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 Y_RNA.471-201ENST00000384312 102 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 RNU6-1235P-201ENST00000384559 107 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 RNU6-101P-201ENST00000410323 104 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 SDAD1P3-201ENST00000427380 333 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 HMGN2P34-201ENST00000437647 269 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 RNU6-498P-201ENST00000459468 107 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 RPL26P26-201ENST00000480251 434 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 AC093852.1-201ENST00000503587 266 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 AC011406.1-201ENST00000512440 370 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.9□□□□□ -2.11
CSPG5O95196 PART1_1.1-201ENST00000611761 217 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
CSPG5O95196 U3.8-201ENST00000363675 217 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 RNU4-50P-201ENST00000364361 141 ntBASIC1.89□□□□□ -2.11
CSPG5O95196 Y_RNA.455-201ENST00000384230 98 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms