Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 U6.92-201ENST00000636464 89 ntBASIC1.67□□□□□ -2.14
Q9N2K0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.67□□□□□ -2.14
Q9N2K0 RNU6-926P-201ENST00000384075 107 ntBASIC1.66□□□□□ -2.14
Q9N2K0 SNORA70B-201ENST00000384210 135 ntBASIC1.66□□□□□ -2.14
Q9N2K0 RNU6-950P-201ENST00000384651 107 ntBASIC1.66□□□□□ -2.14
Q9N2K0 RNA5SP467-201ENST00000391274 118 ntBASIC1.66□□□□□ -2.14
Q9N2K0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
Q9N2K0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
Q9N2K0 AL356320.1-201ENST00000429616 163 ntBASIC1.66□□□□□ -2.14
Q9N2K0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.66□□□□□ -2.14
Q9N2K0 RPS26P45-201ENST00000471748 340 ntBASIC1.66□□□□□ -2.14
Q9N2K0 RPL36AP21-201ENST00000490372 323 ntBASIC1.66□□□□□ -2.14
Q9N2K0 RNU7-99P-201ENST00000516271 62 ntBASIC1.66□□□□□ -2.14
Q9N2K0 Y_RNA.713-201ENST00000517013 96 ntBASIC1.66□□□□□ -2.14
Q9N2K0 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
Q9N2K0 MIR5089-201ENST00000580047 84 ntBASIC1.66□□□□□ -2.14
Q9N2K0 MIR4659A-201ENST00000580269 81 ntBASIC1.66□□□□□ -2.14
Q9N2K0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.66□□□□□ -2.14
Q9N2K0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.66□□□□□ -2.14
Q9N2K0 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.66□□□□□ -2.14
Q9N2K0 AC010205.1-201ENST00000616668 449 ntBASIC1.66□□□□□ -2.14
Q9N2K0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.66□□□□□ -2.14
Q9N2K0 MTND4P29-201ENST00000503122 1372 ntBASIC1.66□□□□□ -2.14
Q9N2K0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Q9N2K0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
Q9N2K0 MIR369-201ENST00000362155 70 ntBASIC1.65□□□□□ -2.15
Q9N2K0 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
Q9N2K0 Y_RNA.128-201ENST00000363391 112 ntBASIC1.65□□□□□ -2.15
Q9N2K0 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AL023284.1-201ENST00000403956 276 ntBASIC1.65□□□□□ -2.15
Q9N2K0 MIR1302-11-201ENST00000408051 138 ntBASIC1.65□□□□□ -2.15
Q9N2K0 MIR1302-9-201ENST00000408365 138 ntBASIC1.65□□□□□ -2.15
Q9N2K0 MIR1302-10-201ENST00000408734 138 ntBASIC1.65□□□□□ -2.15
Q9N2K0 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.65□□□□□ -2.15
Q9N2K0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.65□□□□□ -2.15
Q9N2K0 MRPS10P1-201ENST00000448483 130 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.65□□□□□ -2.15
Q9N2K0 RNU7-94P-201ENST00000459576 63 ntBASIC1.65□□□□□ -2.15
Q9N2K0 RPL23AP42-201ENST00000471152 471 ntBASIC1.65□□□□□ -2.15
Q9N2K0 RPS27P22-201ENST00000478056 241 ntBASIC1.65□□□□□ -2.15
Q9N2K0 HMGB3P17-201ENST00000504195 649 ntBASIC1.65□□□□□ -2.15
Q9N2K0 RN7SKP295-201ENST00000517264 153 ntBASIC1.65□□□□□ -2.15
Q9N2K0 MIR4438-201ENST00000585271 93 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AC005176.2-201ENST00000596933 147 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AC006380.1-201ENST00000603598 186 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AC012493.3-201ENST00000604494 112 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AL121655.1-201ENST00000605811 308 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AC005828.6-201ENST00000606610 232 ntBASIC1.65□□□□□ -2.15
Q9N2K0 Y_RNA.772-201ENST00000606692 102 ntBASIC1.65□□□□□ -2.15
Q9N2K0 MIR1302-2-201ENST00000607096 138 ntBASIC1.65□□□□□ -2.15
Q9N2K0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.65□□□□□ -2.15
Q9N2K0 AC240442.1-201ENST00000616055 283 ntBASIC1.65□□□□□ -2.15
Q9N2K0 U6.115-201ENST00000636045 103 ntBASIC1.65□□□□□ -2.15
Q9N2K0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Q9N2K0 AC006026.1-201ENST00000444025 1803 ntBASIC1.64□□□□□ -2.15
Q9N2K0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Q9N2K0 Y_RNA.11-201ENST00000362375 109 ntBASIC1.64□□□□□ -2.15
Q9N2K0 RNU6-961P-201ENST00000363893 105 ntBASIC1.64□□□□□ -2.15
Q9N2K0 RNU4-50P-201ENST00000364361 141 ntBASIC1.64□□□□□ -2.15
Q9N2K0 SNORA20B-201ENST00000384220 132 ntBASIC1.64□□□□□ -2.15
Q9N2K0 MCFD2P1-201ENST00000417812 300 ntBASIC1.64□□□□□ -2.15
Q9N2K0 MTND4P19-201ENST00000446659 478 ntBASIC1.64□□□□□ -2.15
Q9N2K0 Y_RNA.631-201ENST00000459607 101 ntBASIC1.64□□□□□ -2.15
Q9N2K0 AC010469.2-201ENST00000496412 480 ntBASIC1.64□□□□□ -2.15
Q9N2K0 SNORA25.10-201ENST00000515926 124 ntBASIC1.64□□□□□ -2.15
Q9N2K0 AP002001.1-203ENST00000534002 267 ntBASIC1.64□□□□□ -2.15
Q9N2K0 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
Q9N2K0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.64□□□□□ -2.15
Q9N2K0 SNORD58B-201ENST00000607313 66 ntBASIC1.64□□□□□ -2.15
Q9N2K0 AC134503.1-201ENST00000633048 54 ntBASIC1.64□□□□□ -2.15
Q9N2K0 MIR219B-201ENST00000637023 88 ntBASIC1.64□□□□□ -2.15
Q9N2K0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Q9N2K0 Y_RNA.80-201ENST00000362996 102 ntBASIC1.63□□□□□ -2.15
Q9N2K0 RNU6-454P-201ENST00000364292 107 ntBASIC1.63□□□□□ -2.15
Q9N2K0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.63□□□□□ -2.15
Q9N2K0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Q9N2K0 MIR873-201ENST00000401120 77 ntBASIC1.63□□□□□ -2.15
Q9N2K0 SNORA3.2-201ENST00000408221 125 ntBASIC1.63□□□□□ -2.15
Q9N2K0 RNU6-1186P-201ENST00000410429 97 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AL135786.1-201ENST00000415892 214 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AL390729.2-201ENST00000416137 156 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.63□□□□□ -2.15
Q9N2K0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.63□□□□□ -2.15
Q9N2K0 HSPE1P9-201ENST00000440046 311 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.63□□□□□ -2.15
Q9N2K0 AL163195.1-201ENST00000496941 348 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AC025465.3-201ENST00000510570 311 ntBASIC1.63□□□□□ -2.15
Q9N2K0 SNORA70.12-201ENST00000516084 153 ntBASIC1.63□□□□□ -2.15
Q9N2K0 RNU2-12P-201ENST00000517216 168 ntBASIC1.63□□□□□ -2.15
Q9N2K0 RNU6-988P-201ENST00000519081 107 ntBASIC1.63□□□□□ -2.15
Q9N2K0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.63□□□□□ -2.15
Q9N2K0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.63□□□□□ -2.15
Q9N2K0 AL390123.1-201ENST00000603216 237 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
Q9N2K0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.63□□□□□ -2.15
Q9N2K0 AC004467.1-201ENST00000615678 330 ntBASIC1.63□□□□□ -2.15
Q9N2K0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Q9N2K0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Q9N2K0 AC005592.1-201ENST00000566527 1640 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms