Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6-199P-201ENST00000362954 107 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 MIR491-201ENST00000384877 84 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AC016909.1-201ENST00000415916 166 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AL161788.1-201ENST00000441805 169 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AC115115.1-201ENST00000449927 248 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AC080013.2-201ENST00000460866 323 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 CKS1BP2-201ENST00000497342 240 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 RNU6-479P-201ENST00000516348 105 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 SNORA64.4-201ENST00000516632 81 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 MIR5004-201ENST00000579078 107 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AC090115.4-201ENST00000609970 188 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 uc_338.25-201ENST00000613756 156 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AC012640.5-201ENST00000623897 319 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 RNU6-743P-201ENST00000364151 106 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 RNY3P5-201ENST00000384127 102 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 MIR181A2-201ENST00000384863 110 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 SNORA40-201ENST00000388090 126 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 RNA5SP511-201ENST00000410487 115 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AC010154.1-201ENST00000425857 269 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AL353705.1-201ENST00000433468 480 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 CYP2C59P-201ENST00000457790 269 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 RNU6-437P-201ENST00000459408 95 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AC010531.2-201ENST00000465012 153 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 RPS27P22-201ENST00000478056 241 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 PRELID2P1-201ENST00000552837 301 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AC093732.2-201ENST00000607950 274 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 AC138915.1-201ENST00000565427 1685 ntBASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.98□□□□□ -1.93
PTCHD1Q96NR3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 SNORD56.3-201ENST00000363507 71 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 RNU4-13P-201ENST00000364019 141 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 SNORD21-201ENST00000383953 95 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 SNORD37.2-201ENST00000391075 66 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 AC023141.11-201ENST00000508864 202 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 RNU1-143P-201ENST00000516296 146 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 RNU6-313P-201ENST00000516317 112 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 AC068657.1-201ENST00000520807 306 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 AC015720.1-201ENST00000565251 277 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 U1.23-201ENST00000610293 146 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 RNU1-68P-201ENST00000615382 146 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 U1.39-201ENST00000621562 146 ntBASIC2.97□□□□□ -1.93
PTCHD1Q96NR3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PTCHD1Q96NR3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 CENPCP1-201ENST00000533085 2578 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 RNU1-23P-201ENST00000363361 144 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 RNU6-674P-201ENST00000363831 107 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 RNU6-117P-201ENST00000365415 107 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 SNORD15B-201ENST00000384714 146 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 MIR95-201ENST00000385072 81 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 MIR1278-201ENST00000408753 81 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 AC112693.2-201ENST00000556538 232 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 LARP7P3-201ENST00000579888 337 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 UBL5P2-201ENST00000583788 219 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 MIR8057-201ENST00000620957 69 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 AC073476.4-201ENST00000628409 72 ntBASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PTCHD1Q96NR3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 RNA5SP374-201ENST00000362939 125 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 RNU4-43P-201ENST00000410628 137 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 MTND4LP9-201ENST00000427694 174 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 MTCO1P44-201ENST00000441935 243 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 AL357134.1-201ENST00000445848 426 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 AL365222.1-201ENST00000614661 98 ntBASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PTCHD1Q96NR3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms