Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC009487.4-201ENST00000624969 3585 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU6-525P-201ENST00000363685 104 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU4-11P-201ENST00000365287 132 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 Y_RNA.337-201ENST00000365312 102 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU6-1323P-201ENST00000384025 107 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU6-1235P-201ENST00000384559 107 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU6-1228P-201ENST00000391014 107 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 MIR1289-1-201ENST00000408836 144 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNA5SP293-201ENST00000410527 113 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU4-47P-201ENST00000410876 114 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC006461.1-201ENST00000412637 326 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU6-498P-201ENST00000459468 107 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC010409.1-201ENST00000487382 476 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RPL36AP21-201ENST00000490372 323 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNA5SP272-201ENST00000516095 111 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 POLR3GP1-201ENST00000594073 261 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC005972.2-201ENST00000604690 348 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 AC013412.1-201ENST00000610687 192 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCHD1Q96NR3 RNU6-22P-201ENST00000384355 107 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 RNU6-417P-201ENST00000384712 107 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 MIR15B-201ENST00000385045 98 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 AC008134.1-201ENST00000420943 193 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 HMGN2P18-201ENST00000450680 270 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 RPL27AP5-201ENST00000469428 449 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 RNU6-62P-201ENST00000516526 102 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 RNU7-116P-201ENST00000516940 62 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 AC127455.1-201ENST00000565496 145 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 MIR5739-201ENST00000619803 80 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 MIR3651-201ENST00000630427 90 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 MIR3658-201ENST00000636291 56 ntBASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTCHD1Q96NR3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 SNORA68.1-201ENST00000364537 132 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU6-728P-201ENST00000365375 104 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU6-546P-201ENST00000383991 107 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU6-257P-201ENST00000410238 98 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU2-51P-201ENST00000410708 197 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU2-32P-201ENST00000411193 191 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 AL135786.1-201ENST00000415892 214 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RN7SL504P-201ENST00000494496 287 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU6-561P-201ENST00000516222 102 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 RNU6-63P-201ENST00000516690 95 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 AC006435.5-201ENST00000624486 112 ntBASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCHD1Q96NR3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PTCHD1Q96NR3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PTCHD1Q96NR3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3□□□□□ -1.93
PTCHD1Q96NR3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD1Q96NR3 AC010332.2-201ENST00000613083 1904 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RNU6-643P-201ENST00000384018 107 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 MIR513C-201ENST00000401352 84 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 FO393413.1-201ENST00000402892 195 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3□□□□□ -1.93
PTCHD1Q96NR3 RPL30P13-201ENST00000418873 348 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 AC009969.1-201ENST00000438726 172 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RPL23AP54-201ENST00000495129 419 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 SNORA25.12-201ENST00000516202 82 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RNU2-34P-201ENST00000516534 121 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RNA5SP490-201ENST00000517141 136 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 AC104027.1-201ENST00000521887 300 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 AL161756.2-201ENST00000604597 246 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD1Q96NR3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD1Q96NR3 AC100821.1-201ENST00000523153 2479 ntBASIC3□□□□□ -1.93
PTCHD1Q96NR3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PTCHD1Q96NR3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTCHD1Q96NR3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 AC080128.1-201ENST00000474389 1917 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 FAM35CP-201ENST00000554755 2470 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.99□□□□□ -1.93
PTCHD1Q96NR3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms