Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.66□□□□□ -1.82
IFT43Q96FT9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
IFT43Q96FT9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
IFT43Q96FT9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
IFT43Q96FT9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
IFT43Q96FT9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
IFT43Q96FT9 RNA5SP267-201ENST00000364893 126 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 SNORA72-201ENST00000384339 132 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.65□□□□□ -1.83
IFT43Q96FT9 RPS27P29-201ENST00000463110 252 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 MIR7851-201ENST00000610611 160 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 MIR7975-201ENST00000619350 68 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 MIR7153-201ENST00000637758 57 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
IFT43Q96FT9 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 AC138915.1-201ENST00000565427 1685 ntBASIC3.65□□□□□ -1.83
IFT43Q96FT9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
IFT43Q96FT9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
IFT43Q96FT9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
IFT43Q96FT9 U8.1-201ENST00000362843 134 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 Y_RNA.280-201ENST00000364765 112 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 RPL30P4-201ENST00000429309 333 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.64□□□□□ -1.83
IFT43Q96FT9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.64□□□□□ -1.83
IFT43Q96FT9 RPS12P18-201ENST00000442381 270 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 HMGN2P18-201ENST00000450680 270 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AC023449.1-201ENST00000454464 154 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AC090515.1-201ENST00000465295 476 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 RN7SL442P-201ENST00000473804 320 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 RPS27P22-201ENST00000478056 241 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 RNA5SP153-201ENST00000516498 76 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 RNU2-34P-201ENST00000516534 121 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.64□□□□□ -1.83
IFT43Q96FT9 MIR2681-201ENST00000581814 105 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AC131055.1-201ENST00000584626 316 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AL049861.1-201ENST00000603130 150 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AC002064.3-201ENST00000623448 346 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 AP003355.3-201ENST00000623465 114 ntBASIC3.64□□□□□ -1.83
IFT43Q96FT9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
IFT43Q96FT9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
IFT43Q96FT9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
IFT43Q96FT9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.63□□□□□ -1.83
IFT43Q96FT9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
IFT43Q96FT9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
IFT43Q96FT9 SNORD18B-201ENST00000365659 72 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 RNU6-136P-201ENST00000384663 107 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
IFT43Q96FT9 SNORA40.5-201ENST00000391061 128 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC016909.1-201ENST00000415916 166 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 MICF-203ENST00000432679 129 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC080013.2-201ENST00000460866 323 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 RNU2-27P-201ENST00000516185 142 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 RNA5SP170-201ENST00000517150 101 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC133485.4-201ENST00000561835 220 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC138907.4-201ENST00000570107 226 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 MIR3613-201ENST00000579844 87 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
IFT43Q96FT9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.63□□□□□ -1.83
IFT43Q96FT9 AC073346.2-201ENST00000624724 2058 ntBASIC3.63□□□□□ -1.83
IFT43Q96FT9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
IFT43Q96FT9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 RNU6-805P-201ENST00000365643 106 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 U6atac.2-201ENST00000408644 118 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
IFT43Q96FT9 RPL39P40-201ENST00000445481 146 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 RNU6-965P-201ENST00000516721 96 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 RNU6-579P-201ENST00000516879 102 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 AC107934.2-201ENST00000518653 310 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.62□□□□□ -1.83
IFT43Q96FT9 AL670379.3-201ENST00000605040 251 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 MIR1248-201ENST00000629190 106 ntBASIC3.62□□□□□ -1.83
IFT43Q96FT9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
IFT43Q96FT9 MAPK10-322ENST00000641485 4530 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
IFT43Q96FT9 SNORD9-201ENST00000362566 104 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 Y_RNA.114-201ENST00000363265 113 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 RNU2-70P-201ENST00000410718 179 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 AC126124.2-201ENST00000413542 321 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 CYCSP35-201ENST00000451978 304 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 MIR3922-201ENST00000585192 84 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 AL929325.1-201ENST00000603096 117 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 AC108081.1-201ENST00000604358 221 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 uc_338.4-201ENST00000616635 176 ntBASIC3.61□□□□□ -1.83
IFT43Q96FT9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
IFT43Q96FT9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
IFT43Q96FT9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.61□□□□□ -1.83
IFT43Q96FT9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
IFT43Q96FT9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
IFT43Q96FT9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
IFT43Q96FT9 RNA5SP42-201ENST00000364278 115 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 304.6 ms