Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 AC068647.2-201ENST00000637380 353 ntBASIC3.14□□□□□ -1.91
CTSKP43235 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTSKP43235 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTSKP43235 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
CTSKP43235 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
CTSKP43235 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTSKP43235 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CTSKP43235 RNU1-72P-201ENST00000362976 153 ntBASIC3.13□□□□□ -1.91
CTSKP43235 U8.7-201ENST00000364940 136 ntBASIC3.13□□□□□ -1.91
CTSKP43235 RNU6-22P-201ENST00000384355 107 ntBASIC3.13□□□□□ -1.91
CTSKP43235 Y_RNA.572-201ENST00000384757 98 ntBASIC3.13□□□□□ -1.91
CTSKP43235 Y_RNA.586-201ENST00000391146 98 ntBASIC3.13□□□□□ -1.91
CTSKP43235 U6atac.2-201ENST00000408644 118 ntBASIC3.13□□□□□ -1.91
CTSKP43235 AC008134.1-201ENST00000420943 193 ntBASIC3.13□□□□□ -1.91
CTSKP43235 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSKP43235 RPS12P18-201ENST00000442381 270 ntBASIC3.13□□□□□ -1.91
CTSKP43235 AC010409.1-201ENST00000487382 476 ntBASIC3.13□□□□□ -1.91
CTSKP43235 SCARNA8-201ENST00000515924 131 ntBASIC3.13□□□□□ -1.91
CTSKP43235 RNU6-479P-201ENST00000516348 105 ntBASIC3.13□□□□□ -1.91
CTSKP43235 RNU6-453P-201ENST00000516819 85 ntBASIC3.13□□□□□ -1.91
CTSKP43235 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CTSKP43235 AP003357.1-201ENST00000604497 148 ntBASIC3.13□□□□□ -1.91
CTSKP43235 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CTSKP43235 AC006435.5-201ENST00000624486 112 ntBASIC3.13□□□□□ -1.91
CTSKP43235 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
CTSKP43235 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSKP43235 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSKP43235 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSKP43235 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSKP43235 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
CTSKP43235 Y_RNA.229-201ENST00000364347 113 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RNU6-1027P-201ENST00000383998 107 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RNU6-1323P-201ENST00000384025 107 ntBASIC3.12□□□□□ -1.91
CTSKP43235 SNORD14D-201ENST00000384390 87 ntBASIC3.12□□□□□ -1.91
CTSKP43235 MIR569-201ENST00000385228 96 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RNU1-101P-201ENST00000391171 127 ntBASIC3.12□□□□□ -1.91
CTSKP43235 MIR513C-201ENST00000401352 84 ntBASIC3.12□□□□□ -1.91
CTSKP43235 SNORA36B-201ENST00000410438 131 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RNU6-57P-201ENST00000411348 103 ntBASIC3.12□□□□□ -1.91
CTSKP43235 AL121914.1-201ENST00000450188 156 ntBASIC3.12□□□□□ -1.91
CTSKP43235 AC016925.1-201ENST00000458303 298 ntBASIC3.12□□□□□ -1.91
CTSKP43235 SNORD65B-201ENST00000459126 73 ntBASIC3.12□□□□□ -1.91
CTSKP43235 AC117454.1-201ENST00000491120 168 ntBASIC3.12□□□□□ -1.91
CTSKP43235 SEM1P1-201ENST00000506694 209 ntBASIC3.12□□□□□ -1.91
CTSKP43235 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSKP43235 ATP5EP1-201ENST00000510257 156 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RNU6-426P-201ENST00000516464 97 ntBASIC3.12□□□□□ -1.91
CTSKP43235 RNU2-34P-201ENST00000516534 121 ntBASIC3.12□□□□□ -1.91
CTSKP43235 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSKP43235 AC002064.3-201ENST00000623448 346 ntBASIC3.12□□□□□ -1.91
CTSKP43235 MIR622-201ENST00000638396 96 ntBASIC3.12□□□□□ -1.91
CTSKP43235 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CTSKP43235 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
CTSKP43235 AC091152.2-201ENST00000591628 2569 ntBASIC3.11□□□□□ -1.91
CTSKP43235 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSKP43235 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSKP43235 RNU6-407P-201ENST00000365280 104 ntBASIC3.11□□□□□ -1.91
CTSKP43235 RNU6-728P-201ENST00000365375 104 ntBASIC3.11□□□□□ -1.91
CTSKP43235 RNU6-438P-201ENST00000365561 103 ntBASIC3.11□□□□□ -1.91
CTSKP43235 RNY3P5-201ENST00000384127 102 ntBASIC3.11□□□□□ -1.91
CTSKP43235 RNU6-1235P-201ENST00000384559 107 ntBASIC3.11□□□□□ -1.91
CTSKP43235 RPL30P13-201ENST00000418873 348 ntBASIC3.11□□□□□ -1.91
CTSKP43235 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
CTSKP43235 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSKP43235 RNU6-498P-201ENST00000459468 107 ntBASIC3.11□□□□□ -1.91
CTSKP43235 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSKP43235 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSKP43235 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSKP43235 SCARNA3-201ENST00000517097 143 ntBASIC3.11□□□□□ -1.91
CTSKP43235 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSKP43235 AC005972.2-201ENST00000604690 348 ntBASIC3.11□□□□□ -1.91
CTSKP43235 uc_338.25-201ENST00000613756 156 ntBASIC3.11□□□□□ -1.91
CTSKP43235 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSKP43235 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSKP43235 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSKP43235 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSKP43235 Y_RNA.172-201ENST00000363765 102 ntBASIC3.1□□□□□ -1.91
CTSKP43235 SNORA5B-201ENST00000363786 132 ntBASIC3.1□□□□□ -1.91
CTSKP43235 RNU4-11P-201ENST00000365287 132 ntBASIC3.1□□□□□ -1.91
CTSKP43235 RNU6-643P-201ENST00000384018 107 ntBASIC3.1□□□□□ -1.91
CTSKP43235 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
CTSKP43235 MIR15B-201ENST00000385045 98 ntBASIC3.1□□□□□ -1.91
CTSKP43235 AL606845.1-201ENST00000404881 255 ntBASIC3.1□□□□□ -1.91
CTSKP43235 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
CTSKP43235 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
CTSKP43235 AL137159.1-201ENST00000452808 512 ntBASIC3.1□□□□□ -1.91
CTSKP43235 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
CTSKP43235 RNU6-313P-201ENST00000516317 112 ntBASIC3.1□□□□□ -1.91
CTSKP43235 AC127455.1-201ENST00000565496 145 ntBASIC3.1□□□□□ -1.91
CTSKP43235 AC105245.1-201ENST00000581934 244 ntBASIC3.1□□□□□ -1.91
CTSKP43235 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTSKP43235 AC010332.2-201ENST00000613083 1904 ntBASIC3.09□□□□□ -1.91
CTSKP43235 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSKP43235 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CTSKP43235 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CTSKP43235 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CTSKP43235 RNU6-199P-201ENST00000362954 107 ntBASIC3.09□□□□□ -1.91
CTSKP43235 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
CTSKP43235 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 290.9 ms