Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC016717.2-201ENST00000609089 5141 ntBASIC2.46□□□□□ -2.02
HOXD12P35452 SNORD87-201ENST00000364849 89 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 RNU6-702P-201ENST00000364982 107 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 Y_RNA.376-201ENST00000365638 108 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 Y_RNA.396-201ENST00000383949 103 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 Y_RNA.461-201ENST00000384263 103 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXD12P35452 AC005002.2-201ENST00000438228 269 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXD12P35452 RNU6-107P-201ENST00000516643 102 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 RNU2-19P-201ENST00000517288 84 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXD12P35452 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXD12P35452 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXD12P35452 AC068205.3-201ENST00000636385 468 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
HOXD12P35452 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXD12P35452 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 RNU6-234P-201ENST00000365229 104 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 SNORD63-201ENST00000384262 68 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 Y_RNA.462-201ENST00000384268 102 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 RNU6-505P-201ENST00000384427 107 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 MIR215-201ENST00000384858 110 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 MT-TW-201ENST00000387382 68 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 Y_RNA.602-201ENST00000410535 92 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 RNU5A-5P-201ENST00000411054 116 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXD12P35452 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXD12P35452 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXD12P35452 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXD12P35452 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 AC005176.2-201ENST00000596933 147 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 AC103810.6-201ENST00000606708 136 ntBASIC2.44□□□□□ -2.02
HOXD12P35452 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HOXD12P35452 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HOXD12P35452 RNU6-545P-201ENST00000362681 104 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 SNORD113-8-201ENST00000363497 74 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 RNU6-1305P-201ENST00000364353 104 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 RNU6-472P-201ENST00000384299 107 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 HMGN2P39-201ENST00000398005 273 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 RNA5SP504-201ENST00000410676 117 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXD12P35452 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXD12P35452 RAB28P5-201ENST00000427490 651 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 AK6P2-201ENST00000549020 471 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXD12P35452 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXD12P35452 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXD12P35452 AC011373.1-201ENST00000607270 237 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 MIR1248-201ENST00000629190 106 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 U6.104-201ENST00000637979 90 ntBASIC2.43□□□□□ -2.02
HOXD12P35452 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXD12P35452 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD12P35452 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 Y_RNA.84-201ENST00000363011 104 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 snoU2_19.2-201ENST00000363024 80 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 SNORA72.2-201ENST00000365028 127 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 Y_RNA.401-201ENST00000383965 117 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 SNORA67.2-201ENST00000384300 149 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 Y_RNA.483-201ENST00000384380 101 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 RNU6-1026P-201ENST00000384465 108 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 MIR29C-201ENST00000385231 88 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 RNA5SP210-201ENST00000391034 120 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 RNA5SP475-201ENST00000410568 110 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 AC096920.1-201ENST00000423991 241 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXD12P35452 ATP5EP1-201ENST00000510257 156 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 RNU7-110P-201ENST00000516891 62 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXD12P35452 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 AC004467.1-201ENST00000615678 330 ntBASIC2.42□□□□□ -2.02
HOXD12P35452 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD12P35452 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXD12P35452 SNORD114-1-201ENST00000362705 72 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 RNU6-743P-201ENST00000364151 106 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 Y_RNA.230-201ENST00000364348 109 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 Y_RNA.288-201ENST00000364854 92 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 RNU6-1175P-201ENST00000365200 107 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 RNU4-30P-201ENST00000410245 143 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXD12P35452 TRBVB-201ENST00000477100 408 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXD12P35452 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXD12P35452 AC055872.1-201ENST00000570978 278 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 MIR4423-201ENST00000580922 80 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 AC022202.1-201ENST00000613515 211 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 MIR3674-201ENST00000636576 68 ntBASIC2.41□□□□□ -2.02
HOXD12P35452 AC008555.8-201ENST00000623602 2168 ntBASIC2.4□□□□□ -2.02
HOXD12P35452 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
HOXD12P35452 RNU6-1310P-201ENST00000384153 107 ntBASIC2.4□□□□□ -2.03
HOXD12P35452 RNU6-21P-201ENST00000384710 107 ntBASIC2.4□□□□□ -2.03
HOXD12P35452 Y_RNA.570-201ENST00000384750 101 ntBASIC2.4□□□□□ -2.03
HOXD12P35452 MIR586-201ENST00000385035 97 ntBASIC2.4□□□□□ -2.03
HOXD12P35452 MIR300-201ENST00000401138 83 ntBASIC2.4□□□□□ -2.03
HOXD12P35452 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms