Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 AC007215.1-201ENST00000464893 276 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 SNRPGP7-201ENST00000469016 106 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 RPL30P12-201ENST00000474666 353 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 AC079804.2-201ENST00000490376 200 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 RNU6-567P-201ENST00000516746 107 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 RRN3P3-201ENST00000549207 578 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.42□□□□□ -2.02
TNFRSF8P28908 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF8P28908 AL355297.2-201ENST00000604792 129 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 CTSLP2-204ENST00000629029 392 ntBASIC2.42□□□□□ -2.02
TNFRSF8P28908 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TNFRSF8P28908 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF8P28908 Y_RNA.29-201ENST00000362570 113 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 RNU6-626P-201ENST00000363354 107 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 RNU6-961P-201ENST00000363893 105 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 Y_RNA.570-201ENST00000384750 101 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 AL359511.1-201ENST00000402970 211 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 RPL23AP36-201ENST00000413895 458 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF8P28908 PIGPP3-201ENST00000425307 415 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC112771.1-201ENST00000463581 102 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC108729.3-201ENST00000513484 108 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 SNORA31.16-201ENST00000516773 139 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 RNA5SP54-201ENST00000516951 92 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC004792.1-201ENST00000614523 137 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 AP000553.5-201ENST00000641933 54 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 AC002543.1-201ENST00000299783 1954 ntBASIC2.41□□□□□ -2.02
TNFRSF8P28908 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TNFRSF8P28908 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 Y_RNA.76-201ENST00000362931 109 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 RNU6-529P-201ENST00000363383 104 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 Y_RNA.180-201ENST00000363867 113 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 Y_RNA.200-201ENST00000364018 102 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 Y_RNA.230-201ENST00000364348 109 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 Y_RNA.297-201ENST00000364950 91 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 RNU6-20P-201ENST00000384106 107 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 MIR561-201ENST00000385216 97 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 RNU4-30P-201ENST00000410245 143 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 AL445305.1-201ENST00000432577 575 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 PRELID3BP1-201ENST00000457142 540 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 RPL36AP21-201ENST00000490372 323 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 SNORA40.9-201ENST00000515895 93 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 AC115990.1-201ENST00000526957 301 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 AC005520.5-201ENST00000613926 164 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 AL357075.2-201ENST00000614906 189 ntBASIC2.4□□□□□ -2.03
TNFRSF8P28908 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFRSF8P28908 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
TNFRSF8P28908 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFRSF8P28908 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TNFRSF8P28908 Y_RNA.44-201ENST00000362676 108 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 RNU6-873P-201ENST00000363833 107 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 RNA5SP125-201ENST00000364843 120 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 Y_RNA.355-201ENST00000365462 98 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 Y_RNA.446-201ENST00000384178 104 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 RNU1-57P-201ENST00000384491 166 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TNFRSF8P28908 AL033519.2-201ENST00000403958 392 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 MIR1298-201ENST00000408783 112 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.39□□□□□ -2.03
TNFRSF8P28908 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFRSF8P28908 AC019205.3-201ENST00000424573 156 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 AL138752.1-201ENST00000452964 351 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
TNFRSF8P28908 AC090255.1-201ENST00000495779 349 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 RNU6-1053P-201ENST00000515930 101 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 RNU2-31P-201ENST00000516954 155 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 AC233702.2-202ENST00000562547 291 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 BX322639.1-202ENST00000423987 2213 ntBASIC2.39□□□□□ -2.03
TNFRSF8P28908 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFRSF8P28908 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFRSF8P28908 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TNFRSF8P28908 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFRSF8P28908 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
TNFRSF8P28908 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFRSF8P28908 Y_RNA.140-201ENST00000363474 103 ntBASIC2.38□□□□□ -2.03
TNFRSF8P28908 Y_RNA.569-201ENST00000384749 103 ntBASIC2.38□□□□□ -2.03
TNFRSF8P28908 SNORA53-201ENST00000391141 249 ntBASIC2.38□□□□□ -2.03
TNFRSF8P28908 RNU6-1140P-201ENST00000410517 106 ntBASIC2.38□□□□□ -2.03
TNFRSF8P28908 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFRSF8P28908 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFRSF8P28908 AL390729.2-201ENST00000416137 156 ntBASIC2.38□□□□□ -2.03
TNFRSF8P28908 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFRSF8P28908 MTND2P29-201ENST00000438595 412 ntBASIC2.38□□□□□ -2.03
TNFRSF8P28908 AC009238.1-201ENST00000442165 424 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms