Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.05□□□□□ -2.08
CSPG5O95196 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNU6-1114P-201ENST00000516022 107 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 SNORA25.14-201ENST00000516481 132 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNU4-77P-201ENST00000516692 156 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 RNA5SP54-201ENST00000516951 92 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 Y_RNA.711-201ENST00000516993 102 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 SUMO2P18-201ENST00000518873 252 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 MIR1302-2-201ENST00000607096 138 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 AC083806.3-201ENST00000614016 455 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 TCL6_2.1-201ENST00000615162 119 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 MIR4272-201ENST00000635924 64 ntBASIC2.05□□□□□ -2.08
CSPG5O95196 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.05□□□□□ -2.08
CSPG5O95196 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CSPG5O95196 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CSPG5O95196 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNA5SP361-201ENST00000362686 118 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 SNORD114-6-201ENST00000364393 72 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 SNORA22B-201ENST00000383876 138 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNU6-1011P-201ENST00000384668 107 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNU1-139P-201ENST00000391307 165 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNU4-62P-201ENST00000410125 130 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 EIF1P2-201ENST00000428233 350 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 AC007395.1-201ENST00000451333 677 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 RNU6-1198P-201ENST00000516904 67 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 AC144568.1-201ENST00000520139 137 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 AC006600.1-201ENST00000572529 153 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.04□□□□□ -2.08
CSPG5O95196 AC125232.2-201ENST00000592457 143 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 SNORD58B-201ENST00000607313 66 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 U2.1-201ENST00000618978 145 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
CSPG5O95196 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CSPG5O95196 Y_RNA.28-201ENST00000362554 111 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 RNU6-137P-201ENST00000363680 108 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 RNU6-879P-201ENST00000364328 108 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 RNU1-115P-201ENST00000365329 160 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CSPG5O95196 RNU6-1001P-201ENST00000411265 100 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 AL163540.1-201ENST00000485382 386 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 AC093023.1-201ENST00000547375 507 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
CSPG5O95196 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CSPG5O95196 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
CSPG5O95196 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSPG5O95196 AL159152.1-201ENST00000635019 2587 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 Y_RNA.39-201ENST00000362620 98 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 RNU6-727P-201ENST00000363592 107 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 RNU6-281P-201ENST00000384212 103 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 RNU6-708P-201ENST00000384217 107 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 MIR9-3-201ENST00000385084 90 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 MIR628-201ENST00000385229 95 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 MIR300-201ENST00000401138 83 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 AC074290.1-201ENST00000448883 135 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 AC114982.1-201ENST00000469402 321 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.02□□□□□ -2.09
CSPG5O95196 RNU1-117P-201ENST00000517041 158 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 AP003072.1-201ENST00000531740 145 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 MIR4303-201ENST00000581299 66 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.02□□□□□ -2.09
CSPG5O95196 AL606534.2-204ENST00000635008 178 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.02□□□□□ -2.09
CSPG5O95196 AC091812.1-201ENST00000432235 1948 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 RNU6-280P-201ENST00000364145 104 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 RNU6-318P-201ENST00000384283 103 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 RNU6-321P-201ENST00000410912 106 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 AC016925.1-201ENST00000458303 298 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 AC091179.3-201ENST00000474761 144 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 AC005840.1-201ENST00000498412 377 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 RNU6-988P-201ENST00000519081 107 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
CSPG5O95196 HSBP1P1-201ENST00000555205 166 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 MIR3169-201ENST00000578032 83 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 MIR5188-201ENST00000583467 113 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 AC005786.1-201ENST00000588553 154 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 MZT1P2-201ENST00000604387 248 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 AC040896.1-201ENST00000613819 479 ntBASIC2.01□□□□□ -2.09
CSPG5O95196 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
CSPG5O95196 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.01□□□□□ -2.09
CSPG5O95196 RNU6-1301P-201ENST00000362724 104 ntBASIC2□□□□□ -2.09
CSPG5O95196 RNU6-1305P-201ENST00000364353 104 ntBASIC2□□□□□ -2.09
CSPG5O95196 RNU6-245P-201ENST00000384020 107 ntBASIC2□□□□□ -2.09
CSPG5O95196 RNU6-418P-201ENST00000384035 107 ntBASIC2□□□□□ -2.09
CSPG5O95196 SNORA8-201ENST00000384574 139 ntBASIC2□□□□□ -2.09
CSPG5O95196 MIR1283-1-201ENST00000408494 87 ntBASIC2□□□□□ -2.09
CSPG5O95196 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2□□□□□ -2.09
CSPG5O95196 AC009237.7-201ENST00000447357 229 ntBASIC2□□□□□ -2.09
CSPG5O95196 RNU1-131P-201ENST00000458943 161 ntBASIC2□□□□□ -2.09
CSPG5O95196 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2□□□□□ -2.09
CSPG5O95196 VN1R91P-201ENST00000594377 169 ntBASIC2□□□□□ -2.09
CSPG5O95196 AC016925.2-201ENST00000605108 242 ntBASIC2□□□□□ -2.09
CSPG5O95196 AC010999.1-201ENST00000611856 324 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms