Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU6-755P-201ENST00000364400 103 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 RNU4-41P-201ENST00000364426 143 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 RNA5SP72-201ENST00000364442 117 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 RNU6-586P-201ENST00000517265 104 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 AC012531.5-201ENST00000611375 151 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 AC006435.5-201ENST00000624486 112 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 U6.95-201ENST00000636931 70 ntBASIC3.7□□□□□ -1.82
IFT43Q96FT9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
IFT43Q96FT9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
IFT43Q96FT9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
IFT43Q96FT9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.7□□□□□ -1.82
IFT43Q96FT9 AC091564.4-201ENST00000533934 2194 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
IFT43Q96FT9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
IFT43Q96FT9 RNU6-235P-201ENST00000362644 107 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 RNA5SP293-201ENST00000410527 113 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 CYCSP49-201ENST00000420810 319 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 AC010401.1-201ENST00000463867 348 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 AC010531.2-201ENST00000465012 153 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 AC104619.4-201ENST00000510773 249 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 MRPS36P2-201ENST00000512569 299 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 RNU6-63P-201ENST00000516690 95 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 AC025647.1-201ENST00000517879 253 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.69□□□□□ -1.82
IFT43Q96FT9 MTND5P34-201ENST00000568888 325 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 MIR3121-201ENST00000579680 77 ntBASIC3.69□□□□□ -1.82
IFT43Q96FT9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
IFT43Q96FT9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
IFT43Q96FT9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.69□□□□□ -1.82
IFT43Q96FT9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
IFT43Q96FT9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
IFT43Q96FT9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
IFT43Q96FT9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
IFT43Q96FT9 Y_RNA.43-201ENST00000362670 111 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNU1-72P-201ENST00000362976 153 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNU4-13P-201ENST00000364019 141 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNU6-418P-201ENST00000384035 107 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 MIR181A2-201ENST00000384863 110 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 MIR183-201ENST00000384958 110 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNA5SP511-201ENST00000410487 115 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 AC008134.1-201ENST00000420943 193 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.68□□□□□ -1.82
IFT43Q96FT9 CYCSP4-201ENST00000429682 331 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 AL353705.1-201ENST00000433468 480 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 AC016925.1-201ENST00000458303 298 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNU5E-3P-201ENST00000515913 68 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 RNU6-589P-201ENST00000516485 107 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 AC018630.3-201ENST00000542637 96 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
IFT43Q96FT9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.68□□□□□ -1.82
IFT43Q96FT9 AL021707.8-201ENST00000609428 183 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 AC096577.2-201ENST00000611455 153 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
IFT43Q96FT9 AC110079.1-202ENST00000635213 138 ntBASIC3.68□□□□□ -1.82
IFT43Q96FT9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
IFT43Q96FT9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.68□□□□□ -1.82
IFT43Q96FT9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
IFT43Q96FT9 Z82209.1-201ENST00000422141 2135 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.67□□□□□ -1.82
IFT43Q96FT9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNU6-1298P-201ENST00000362456 101 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 Y_RNA.120-201ENST00000363304 110 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNA5SP387-201ENST00000364226 106 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNU6-978P-201ENST00000364371 103 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNU6-438P-201ENST00000365561 103 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNU6-1235P-201ENST00000384559 107 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 MIR218-2-201ENST00000385006 110 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
IFT43Q96FT9 AC006989.1-201ENST00000427212 131 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RPL23AP83-201ENST00000434984 473 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNU6-498P-201ENST00000459468 107 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 RN7SL293P-201ENST00000481765 281 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.67□□□□□ -1.82
IFT43Q96FT9 RNU6-772P-201ENST00000516042 105 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 AC007179.3-201ENST00000604976 235 ntBASIC3.67□□□□□ -1.82
IFT43Q96FT9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT43Q96FT9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.67□□□□□ -1.82
IFT43Q96FT9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
IFT43Q96FT9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
IFT43Q96FT9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
IFT43Q96FT9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
IFT43Q96FT9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 Y_RNA.333-201ENST00000365274 102 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 RNU6-117P-201ENST00000365415 107 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 SNORA22-201ENST00000383907 134 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 RNU6-484P-201ENST00000384016 107 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 AL158147.1-201ENST00000443970 75 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 AC015720.1-201ENST00000565251 277 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 MIR4679-2-201ENST00000578358 77 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 AC013412.1-201ENST00000610687 192 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 U6.105-201ENST00000637379 88 ntBASIC3.66□□□□□ -1.82
IFT43Q96FT9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
IFT43Q96FT9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms