Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 MIR548B-201ENST00000385247 97 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 Y_RNA.645-201ENST00000391229 102 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 MIR1283-2-201ENST00000408621 87 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 ELOCP21-201ENST00000412558 336 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 AC123900.1-201ENST00000420390 96 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 Y_RNA.683-201ENST00000516508 93 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 AC144568.1-201ENST00000520139 137 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 AL356055.1-201ENST00000602528 446 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 AC022513.1-201ENST00000624512 117 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 AC068205.3-201ENST00000636385 468 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
PPP4R1Q8TF05 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
PPP4R1Q8TF05 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 Y_RNA.99-201ENST00000363138 105 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 RNU6-450P-201ENST00000364654 107 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 MIR586-201ENST00000385035 97 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 MIR628-201ENST00000385229 95 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PPP4R1Q8TF05 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 SNORD12B-201ENST00000410433 91 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2□□□□□ -2.09
PPP4R1Q8TF05 AC007395.1-201ENST00000451333 677 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2□□□□□ -2.09
PPP4R1Q8TF05 AL442163.3-201ENST00000554110 156 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2□□□□□ -2.09
PPP4R1Q8TF05 AC055872.1-201ENST00000570978 278 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 RPL17P51-201ENST00000605218 238 ntBASIC2□□□□□ -2.09
PPP4R1Q8TF05 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2□□□□□ -2.09
PPP4R1Q8TF05 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
PPP4R1Q8TF05 LINC02555-201ENST00000563933 1951 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 Y_RNA.28-201ENST00000362554 111 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 Y_RNA.39-201ENST00000362620 98 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 RNU6-961P-201ENST00000363893 105 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 MIR320B2-201ENST00000408479 138 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AC016909.1-201ENST00000415916 166 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AC112492.4-201ENST00000456549 352 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 RPL26P26-201ENST00000480251 434 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AL163540.1-201ENST00000485382 386 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 SNORA40.9-201ENST00000515895 93 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 RN7SKP49-201ENST00000516675 260 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 RNU6-1137P-201ENST00000517073 99 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AP005660.1-201ENST00000522972 293 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AC026271.5-201ENST00000577873 130 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 MIR3169-201ENST00000578032 83 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 MIR4753-201ENST00000585119 83 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 VN1R91P-201ENST00000594377 169 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AL109918.3-201ENST00000603072 338 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 AL078596.1-201ENST00000624856 447 ntBASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
PPP4R1Q8TF05 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 RNA5SP493-201ENST00000364115 91 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 RNU6-975P-201ENST00000384296 105 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 RNY3P4-201ENST00000384428 101 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 MIR300-201ENST00000401138 83 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 RNU6-57P-201ENST00000411348 103 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 UQCRBP2-201ENST00000447827 297 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 HSBP1P1-201ENST00000555205 166 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 AC040896.1-201ENST00000613819 479 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.98□□□□□ -2.09
PPP4R1Q8TF05 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 RNU6-1227P-201ENST00000383981 107 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 RNU6-1012P-201ENST00000516606 109 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 AP003072.1-201ENST00000531740 145 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 AC104695.3-201ENST00000604052 296 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 AL021879.1-201ENST00000611756 288 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 AC083806.3-201ENST00000614016 455 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 AC005592.1-201ENST00000566527 1640 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.97□□□□□ -2.09
PPP4R1Q8TF05 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 RNU6-160P-201ENST00000384591 107 ntBASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 Y_RNA.595-201ENST00000410403 105 ntBASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 AC060773.1-201ENST00000421698 310 ntBASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
PPP4R1Q8TF05 RNU7-57P-201ENST00000459540 60 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms