Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SCARNA16.2-201ENST00000516520 172 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 CYCSP23-201ENST00000519781 313 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.02□□□□□ -2.09
TM4SF1P30408 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.02□□□□□ -2.09
TM4SF1P30408 UBL5P4-201ENST00000562584 236 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.02□□□□□ -2.09
TM4SF1P30408 MIR5701-3-201ENST00000578890 82 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 MIR548S-201ENST00000581352 82 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 MIR5701-1-201ENST00000585138 82 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.02□□□□□ -2.09
TM4SF1P30408 AC010999.1-201ENST00000611856 324 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 MIR5701-2-201ENST00000615634 82 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TM4SF1P30408 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TM4SF1P30408 RNU6-1266P-201ENST00000362794 105 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 Y_RNA.106-201ENST00000363189 100 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 SNORA7.1-201ENST00000363750 139 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 RNU4-13P-201ENST00000364019 141 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 Y_RNA.390-201ENST00000383932 102 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 RNU6-57P-201ENST00000411348 103 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 AL445305.1-201ENST00000432577 575 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 NDUFB4P10-201ENST00000452541 359 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 Y_RNA.653-201ENST00000459091 95 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.01□□□□□ -2.09
TM4SF1P30408 Y_RNA.683-201ENST00000516508 93 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 RNA5SP384-201ENST00000516615 116 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.01□□□□□ -2.09
TM4SF1P30408 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.01□□□□□ -2.09
TM4SF1P30408 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TM4SF1P30408 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TM4SF1P30408 MTND5P16-201ENST00000460269 1703 ntBASIC2□□□□□ -2.09
TM4SF1P30408 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2□□□□□ -2.09
TM4SF1P30408 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
TM4SF1P30408 RNU6-727P-201ENST00000363592 107 ntBASIC2□□□□□ -2.09
TM4SF1P30408 U3.8-201ENST00000363675 217 ntBASIC2□□□□□ -2.09
TM4SF1P30408 Y_RNA.224-201ENST00000364308 111 ntBASIC2□□□□□ -2.09
TM4SF1P30408 Y_RNA.404-201ENST00000383978 102 ntBASIC2□□□□□ -2.09
TM4SF1P30408 RNU6-331P-201ENST00000384724 107 ntBASIC2□□□□□ -2.09
TM4SF1P30408 MIR10B-201ENST00000385011 110 ntBASIC2□□□□□ -2.09
TM4SF1P30408 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
TM4SF1P30408 RNU6-1009P-201ENST00000390996 107 ntBASIC2□□□□□ -2.09
TM4SF1P30408 EBAG9P1-201ENST00000418955 543 ntBASIC2□□□□□ -2.09
TM4SF1P30408 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2□□□□□ -2.09
TM4SF1P30408 AC112492.4-201ENST00000456549 352 ntBASIC2□□□□□ -2.09
TM4SF1P30408 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2□□□□□ -2.09
TM4SF1P30408 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
TM4SF1P30408 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2□□□□□ -2.09
TM4SF1P30408 Y_RNA.259-201ENST00000364619 101 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 Y_RNA.387-201ENST00000383918 102 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR515-2-201ENST00000384883 83 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR515-1-201ENST00000384884 83 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR625-201ENST00000385047 85 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MTCYBP4-201ENST00000401524 249 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 AC016717.1-201ENST00000448918 286 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.99□□□□□ -2.09
TM4SF1P30408 AC011406.1-201ENST00000512440 370 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 RNU6-1041P-201ENST00000516254 102 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 AC093023.1-201ENST00000547375 507 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR4421-201ENST00000578133 69 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR5094-201ENST00000578766 85 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
TM4SF1P30408 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.99□□□□□ -2.09
TM4SF1P30408 AL353149.1-201ENST00000610667 244 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 MIR1302-1-201ENST00000637932 143 ntBASIC1.99□□□□□ -2.09
TM4SF1P30408 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.99□□□□□ -2.09
TM4SF1P30408 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
TM4SF1P30408 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TM4SF1P30408 RNU6-222P-201ENST00000362438 107 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 RNU6-1188P-201ENST00000363795 107 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 SNORA72.2-201ENST00000365028 127 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 Y_RNA.466-201ENST00000384294 113 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TM4SF1P30408 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.98□□□□□ -2.09
TM4SF1P30408 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.98□□□□□ -2.09
TM4SF1P30408 MTND5P20-201ENST00000448677 143 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 AC091179.3-201ENST00000474761 144 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.98□□□□□ -2.09
TM4SF1P30408 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.98□□□□□ -2.09
TM4SF1P30408 RNVU1-2-201ENST00000516326 135 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 AC006001.4-201ENST00000622243 395 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
TM4SF1P30408 SNORA67.6-201ENST00000391093 99 ntBASIC1.97□□□□□ -2.09
TM4SF1P30408 SNORA75.6-201ENST00000391318 127 ntBASIC1.97□□□□□ -2.09
TM4SF1P30408 MIR1323-201ENST00000408090 73 ntBASIC1.97□□□□□ -2.09
TM4SF1P30408 CST2P1-201ENST00000425770 87 ntBASIC1.97□□□□□ -2.09
TM4SF1P30408 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.97□□□□□ -2.09
TM4SF1P30408 RPL30P15-201ENST00000457129 321 ntBASIC1.97□□□□□ -2.09
TM4SF1P30408 RNU1-123P-201ENST00000458950 160 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms