Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RNU6-370P-201ENST00000411008 104 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.06□□□□□ -2.08
TM4SF1P30408 MTCO3P29-201ENST00000432119 779 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AL353997.1-201ENST00000432936 108 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.06□□□□□ -2.08
TM4SF1P30408 UBE2V1P7-201ENST00000446395 340 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 ATP5J2P3-201ENST00000451550 258 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 HMGN2P9-201ENST00000476875 229 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 HMGN1P12-201ENST00000499125 195 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 RNU6-1114P-201ENST00000516022 107 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 RNU6-856P-201ENST00000516959 98 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 RNU6-264P-201ENST00000517134 104 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.06□□□□□ -2.08
TM4SF1P30408 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.06□□□□□ -2.08
TM4SF1P30408 AP001094.1-201ENST00000579805 193 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AC113139.1-201ENST00000605049 239 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AC005296.1-201ENST00000616145 209 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AL162373.1-201ENST00000620433 407 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 AC008873.1-201ENST00000625051 138 ntBASIC2.06□□□□□ -2.08
TM4SF1P30408 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TM4SF1P30408 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TM4SF1P30408 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
TM4SF1P30408 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TM4SF1P30408 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TM4SF1P30408 RNU6-975P-201ENST00000384296 105 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 Y_RNA.473-201ENST00000384333 102 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 MIR487A-201ENST00000385009 80 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TM4SF1P30408 SNORA48.1-201ENST00000390879 135 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 AL356432.1-201ENST00000405809 419 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 RNA5SP501-201ENST00000410990 112 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 MTCO1P44-201ENST00000441935 243 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 RPL23AP3-201ENST00000453844 468 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.05□□□□□ -2.08
TM4SF1P30408 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 AP000870.1-201ENST00000472927 406 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 RNU6-1146P-201ENST00000516282 102 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 MIR5695-201ENST00000579717 85 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 SNORA4-201ENST00000584302 138 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 AL355802.3-201ENST00000607571 545 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.05□□□□□ -2.08
TM4SF1P30408 AC068205.3-201ENST00000636385 468 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 AL669831.3-213ENST00000636676 183 ntBASIC2.05□□□□□ -2.08
TM4SF1P30408 SNORA72.1-201ENST00000363485 129 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 Y_RNA.142-201ENST00000363491 102 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 Y_RNA.179-201ENST00000363844 90 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 Y_RNA.384-201ENST00000383909 102 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 RNU6-418P-201ENST00000384035 107 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 MIR190B-201ENST00000401119 79 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 MTND3P23-201ENST00000431980 347 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.04□□□□□ -2.08
TM4SF1P30408 MTND4P17-201ENST00000470444 350 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.04□□□□□ -2.08
TM4SF1P30408 AC097473.1-201ENST00000508142 408 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 AC091144.1-201ENST00000519573 138 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.04□□□□□ -2.08
TM4SF1P30408 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.04□□□□□ -2.08
TM4SF1P30408 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 AC092794.2-201ENST00000620933 563 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 AC091932.3-201ENST00000624223 323 ntBASIC2.04□□□□□ -2.08
TM4SF1P30408 SNORA8-201ENST00000384574 139 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.03□□□□□ -2.08
TM4SF1P30408 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TM4SF1P30408 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC008134.1-201ENST00000420943 193 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC093019.1-201ENST00000443135 252 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.03□□□□□ -2.08
TM4SF1P30408 RNU7-87P-201ENST00000459343 62 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 RNU7-57P-201ENST00000459540 60 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 RPL17P19-201ENST00000489069 552 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC105029.1-201ENST00000520250 669 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC004584.2-201ENST00000570407 410 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC090617.3-201ENST00000573670 475 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 SNORD53B-201ENST00000577887 78 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AC069114.2-201ENST00000604699 304 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.03□□□□□ -2.08
TM4SF1P30408 AC005014.2-201ENST00000607795 599 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
TM4SF1P30408 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TM4SF1P30408 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
TM4SF1P30408 Y_RNA.364-201ENST00000365532 101 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 RNU6-1297P-201ENST00000384415 104 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 RNU1-139P-201ENST00000391307 165 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 AC004866.1-201ENST00000411748 78 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TM4SF1P30408 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.02□□□□□ -2.09
TM4SF1P30408 AC092423.1-201ENST00000430165 186 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 snoU13.18-201ENST00000459483 104 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.02□□□□□ -2.09
TM4SF1P30408 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
TM4SF1P30408 RNU6-559P-201ENST00000516151 98 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms