Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNY3P9-201ENST00000384727 106 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 MIR487A-201ENST00000385009 80 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 RNU6-440P-201ENST00000390882 105 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 MRPL42P3-201ENST00000401492 326 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 RNU6-325P-201ENST00000411132 105 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 RN7SKP142-201ENST00000411236 328 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 AL663109.1-201ENST00000411498 844 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 AC245047.3-201ENST00000429428 127 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 MTND1P5-201ENST00000517906 940 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 MTND1P35-201ENST00000526739 508 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 MTATP6P24-201ENST00000576835 677 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 AC008088.1-201ENST00000580993 280 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 AL357078.3-201ENST00000607528 618 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 SNORD11B-201ENST00000607707 90 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 OR4G1P-203ENST00000641984 1631 ntBASIC0.85□□□□□ -2.27
CCNB1IP1Q9NPC3 MIR337-201ENST00000362281 93 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 Y_RNA.169-201ENST00000363745 96 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 RNU6-245P-201ENST00000384020 107 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 RNU6-38P-201ENST00000384085 107 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 AL606489.2-201ENST00000433886 234 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 RPL23AP75-201ENST00000491601 451 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 AC092436.3-201ENST00000511788 257 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 RNU6-1038P-201ENST00000516516 104 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.84□□□□□ -2.27
CCNB1IP1Q9NPC3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD115-8-201ENST00000363856 82 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD115-38-201ENST00000365037 82 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.378-201ENST00000365652 113 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AL034345.1-201ENST00000407768 123 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 USP9YP29-201ENST00000445112 563 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 MTCO1P29-201ENST00000496868 288 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.654-201ENST00000497848 106 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-922P-201ENST00000516753 99 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 RNA5SP54-201ENST00000516951 92 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU1-117P-201ENST00000517041 158 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AC100830.2-201ENST00000581636 240 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AL121757.2-201ENST00000611223 313 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 AC073349.3-201ENST00000617616 186 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 U6.73-201ENST00000619194 103 ntBASIC0.83□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.381-201ENST00000365666 102 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR653-201ENST00000385279 96 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC245047.7-201ENST00000440265 293 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.638-201ENST00000459374 113 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 HMGB1P29-201ENST00000505659 499 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC105758.1-201ENST00000506038 399 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORA19.2-201ENST00000516013 114 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC022432.1-201ENST00000595739 310 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC087752.4-201ENST00000605911 462 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 AC017083.3-201ENST00000609955 700 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD3E-202ENST00000627253 216 ntBASIC0.82□□□□□ -2.28
CCNB1IP1Q9NPC3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.167-201ENST00000363735 109 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR521-1-201ENST00000384902 87 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD41-201ENST00000386967 70 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 MTCO1P20-201ENST00000425366 358 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 MRPS10P2-201ENST00000431226 381 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 MTCO2P16-201ENST00000436962 677 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD79.1-201ENST00000516069 84 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU7-99P-201ENST00000516271 62 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 RNA5SP168-201ENST00000516642 112 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 RNA5SP454-201ENST00000517231 127 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AL137100.2-201ENST00000555786 315 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR4760-201ENST00000585040 80 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AL162424.1-201ENST00000602325 221 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 AC106754.2-201ENST00000623006 233 ntBASIC0.81□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD114-24-201ENST00000365029 72 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU4-20P-201ENST00000365601 151 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-214P-201ENST00000384130 107 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORA75-201ENST00000384158 137 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 544.5 ms