Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNA5SP100-201ENST00000410903 110 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 RNA5SP59-201ENST00000410922 110 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC008134.1-201ENST00000420943 193 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.96□□□□□ -2.1
CMTM3Q96MX0 U8.22-201ENST00000459141 133 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.96□□□□□ -2.1
CMTM3Q96MX0 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 RNA5SP24-201ENST00000516478 95 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 MIR2355-201ENST00000517199 87 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC025647.1-201ENST00000517879 253 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 LARP7P1-201ENST00000605576 316 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC103810.6-201ENST00000606708 136 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC084781.2-201ENST00000615568 161 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC112487.2-201ENST00000637950 304 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CMTM3Q96MX0 RNU1-96P-201ENST00000364163 162 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 RNU6-879P-201ENST00000364328 108 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 MIR518C-201ENST00000384822 101 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 MT-TD-201ENST00000387419 68 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC114482.1-201ENST00000418010 247 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.95□□□□□ -2.1
CMTM3Q96MX0 RPS15AP28-201ENST00000435088 386 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.95□□□□□ -2.1
CMTM3Q96MX0 SNORD19B-201ENST00000459623 84 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 MTND3P22-201ENST00000510932 243 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 RNA5SP356-201ENST00000515972 94 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 RNU7-4P-201ENST00000516961 62 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC022868.1-201ENST00000517767 391 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC022254.1-201ENST00000567857 235 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC010900.2-201ENST00000604508 210 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 Y_RNA.804-201ENST00000615262 101 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC087588.2-201ENST00000617667 426 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC009831.4-201ENST00000620744 325 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 AC006001.4-201ENST00000622243 395 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 MIR338-201ENST00000636369 67 ntBASIC1.95□□□□□ -2.1
CMTM3Q96MX0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 Y_RNA.67-201ENST00000362870 100 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 RNU6-490P-201ENST00000362985 107 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 Y_RNA.187-201ENST00000363918 113 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 SNORA69.1-201ENST00000390904 137 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 CST2P1-201ENST00000425770 87 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC236972.2-201ENST00000434979 310 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 RNU7-152P-201ENST00000458982 64 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 RN7SKP49-201ENST00000516675 260 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC144568.1-201ENST00000520139 137 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 EIF4BP1-201ENST00000554881 351 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC069114.2-201ENST00000604699 304 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AL008636.1-201ENST00000625038 1018 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC243829.7-201ENST00000633081 225 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CMTM3Q96MX0 MTND5P10-201ENST00000603719 1809 ntBASIC1.94□□□□□ -2.1
CMTM3Q96MX0 AC073544.1-201ENST00000600110 1595 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CMTM3Q96MX0 SNORA80A-201ENST00000363922 136 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 MIR559-201ENST00000385188 96 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CMTM3Q96MX0 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 AC016909.1-201ENST00000415916 166 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 PCNPP5-201ENST00000452246 481 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 AC074133.1-201ENST00000515696 183 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 AC091144.1-201ENST00000519573 138 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.93□□□□□ -2.1
CMTM3Q96MX0 AC093027.1-201ENST00000546698 429 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
CMTM3Q96MX0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.93□□□□□ -2.1
CMTM3Q96MX0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CMTM3Q96MX0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CMTM3Q96MX0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CMTM3Q96MX0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNA5SP361-201ENST00000362686 118 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNU4-73P-201ENST00000363164 141 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNU6-1040P-201ENST00000383974 107 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNU6-318P-201ENST00000384283 103 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 Y_RNA.592-201ENST00000410274 109 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNU2-52P-201ENST00000410680 190 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms