Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.79□□□□□ -1.8
IFT43Q96FT9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.79□□□□□ -1.8
IFT43Q96FT9 RPL36AP21-201ENST00000490372 323 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 RNU7-116P-201ENST00000516940 62 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 MIR4738-201ENST00000579134 87 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 POLR3GP1-201ENST00000594073 261 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
IFT43Q96FT9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFT43Q96FT9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFT43Q96FT9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.79□□□□□ -1.8
IFT43Q96FT9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
IFT43Q96FT9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
IFT43Q96FT9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
IFT43Q96FT9 AL391516.1-201ENST00000554380 2449 ntBASIC3.79□□□□□ -1.8
IFT43Q96FT9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
IFT43Q96FT9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
IFT43Q96FT9 SNORD46.1-201ENST00000364139 104 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 SNORD14D-201ENST00000384390 87 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 SNORD116-13-201ENST00000384408 92 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 RNU6-476P-201ENST00000384726 107 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.78□□□□□ -1.8
IFT43Q96FT9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
IFT43Q96FT9 RNU7-107P-201ENST00000459121 61 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 SNORD65B-201ENST00000459126 73 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 RPS26P55-201ENST00000471178 356 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 FCF1P8-201ENST00000510322 597 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 RNA5SP76-201ENST00000516277 87 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 AC090142.3-201ENST00000519012 385 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 CYCSP26-201ENST00000534107 320 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.78□□□□□ -1.8
IFT43Q96FT9 MIR378D2-201ENST00000580636 98 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
IFT43Q96FT9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFT43Q96FT9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
IFT43Q96FT9 SNORA63.1-201ENST00000362493 131 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 SNORD45.3-201ENST00000363836 72 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 SNORA70.4-201ENST00000365509 134 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 RNU6-975P-201ENST00000384296 105 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
IFT43Q96FT9 RNA5SP496-201ENST00000391240 109 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.77□□□□□ -1.81
IFT43Q96FT9 AC009414.1-201ENST00000427200 443 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.77□□□□□ -1.81
IFT43Q96FT9 SNRPGP8-201ENST00000454064 226 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 RNU6-221P-201ENST00000459541 99 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 AC127455.1-201ENST00000565496 145 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 Y_RNA.757-201ENST00000578934 114 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 AC005972.2-201ENST00000604690 348 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
IFT43Q96FT9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
IFT43Q96FT9 AC058791.1-201ENST00000608412 3198 ntBASIC3.77□□□□□ -1.81
IFT43Q96FT9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
IFT43Q96FT9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
IFT43Q96FT9 GABRG2-229ENST00000641017 3628 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.76□□□□□ -1.81
IFT43Q96FT9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
IFT43Q96FT9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
IFT43Q96FT9 RNU6-486P-201ENST00000363116 107 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 RNU6-1144P-201ENST00000384247 104 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 RNU6-429P-201ENST00000384582 108 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 Y_RNA.584-201ENST00000391090 114 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 RNY4P18-201ENST00000391107 89 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 AL512604.1-201ENST00000404812 257 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 MIR1278-201ENST00000408753 81 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 AC245047.4-201ENST00000433189 144 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 AL357134.1-201ENST00000445848 426 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.76□□□□□ -1.81
IFT43Q96FT9 RN7SKP83-201ENST00000516512 178 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 AC109329.2-201ENST00000519658 482 ntBASIC3.76□□□□□ -1.81
IFT43Q96FT9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
IFT43Q96FT9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.76□□□□□ -1.81
IFT43Q96FT9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
IFT43Q96FT9 RNY1P11-201ENST00000363759 113 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 RNU6-234P-201ENST00000365229 104 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 RNU6-57P-201ENST00000411348 103 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 AL035423.1-201ENST00000420331 213 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 AC106707.2-201ENST00000484182 374 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 AC083906.5-201ENST00000503722 328 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 CYCTP-201ENST00000504253 315 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 RN7SKP18-201ENST00000516005 275 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 AC093331.1-201ENST00000521474 169 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 AC023043.3-201ENST00000593113 385 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 AL031274.2-201ENST00000599419 203 ntBASIC3.75□□□□□ -1.81
IFT43Q96FT9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.75□□□□□ -1.81
IFT43Q96FT9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms