Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.203-201ENST00000364106 102 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD46.1-201ENST00000364139 104 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.634-201ENST00000364811 113 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD58C-201ENST00000365223 64 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD18B-201ENST00000365659 72 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 GOT2P5-201ENST00000433995 546 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AC006028.1-201ENST00000438379 402 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AL133547.1-201ENST00000448546 220 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AL031183.1-201ENST00000457667 207 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AC080013.2-201ENST00000460866 323 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.690-201ENST00000516603 95 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 RNU2-60P-201ENST00000517290 128 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 AC107934.2-201ENST00000518653 310 ntBASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.91-201ENST00000363042 107 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-647P-201ENST00000364243 107 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD116-21-201ENST00000384507 92 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.617-201ENST00000410920 90 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 RPL30P4-201ENST00000429309 333 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 AC245102.2-201ENST00000448956 180 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 AC023449.1-201ENST00000454464 154 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 RPL23AP91-201ENST00000569211 455 ntBASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB11Q9Y5F2 AL161912.2-201ENST00000565707 3007 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-486P-201ENST00000363116 107 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 SNORA70.4-201ENST00000365509 134 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 MIR548A3-201ENST00000385297 97 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 SNORA57.3-201ENST00000411095 141 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 AC016909.1-201ENST00000415916 166 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 RPS26P45-201ENST00000471748 340 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 RPS27P22-201ENST00000478056 241 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 NDUFA5P6-201ENST00000542110 379 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 AC091178.2-201ENST00000584401 117 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 AC103988.1-201ENST00000566382 2177 ntBASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB11Q9Y5F2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-418P-201ENST00000384035 107 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 SNORA26-201ENST00000391286 122 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD11-201ENST00000459124 84 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 AC105245.1-201ENST00000581934 244 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 RMST_8.1-201ENST00000610287 165 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 uc_338.32-201ENST00000615087 172 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 MIR4679-1-201ENST00000637619 75 ntBASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB11Q9Y5F2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB11Q9Y5F2 GABRG2-229ENST00000641017 3628 ntBASIC3.9□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.35-201ENST00000362601 101 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 RNA5SP387-201ENST00000364226 106 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 MIR1251-201ENST00000408552 70 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 AC063976.3-201ENST00000426849 329 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 RPS4XP11-201ENST00000446897 772 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 RNU2-34P-201ENST00000516534 121 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 AC018630.3-201ENST00000542637 96 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 AC004832.5-201ENST00000608677 401 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 AC013412.1-201ENST00000610687 192 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 253.9 ms