Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2□□□□□ -2.09
CMTM3Q96MX0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2□□□□□ -2.09
CMTM3Q96MX0 AC063976.3-201ENST00000426849 329 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2□□□□□ -2.09
CMTM3Q96MX0 AC010095.1-201ENST00000443543 144 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 RPL23AP6-201ENST00000446637 472 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 ELOCP24-201ENST00000456370 334 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC022493.2-201ENST00000506122 481 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC008413.1-201ENST00000511864 177 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC011406.1-201ENST00000512440 370 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 RNU6-120P-201ENST00000516077 103 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.683-201ENST00000516508 93 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.718-201ENST00000517110 102 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR5007-201ENST00000583098 95 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR1244-1-201ENST00000612829 85 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 DLEU1_1.1-201ENST00000618107 190 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 snoZ196.1-201ENST00000625269 89 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR1244-3-201ENST00000635744 85 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR1244-2-201ENST00000636449 85 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 MIR1244-4-202ENST00000636813 85 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
CMTM3Q96MX0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CMTM3Q96MX0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.358-201ENST00000365491 99 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 SNORD116-29-201ENST00000384516 83 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 MIR548B-201ENST00000385247 97 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 RNY4P36-201ENST00000391116 96 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 RNU6-57P-201ENST00000411348 103 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 MTND4LP11-201ENST00000422184 280 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 SNORD109B-201ENST00000458961 67 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 SNORD109A-201ENST00000459128 67 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 MIR2053-201ENST00000459295 91 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 YWHAEP4-201ENST00000505390 198 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 CYCSP23-201ENST00000519781 313 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
CMTM3Q96MX0 AK6P2-201ENST00000549020 471 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 SUB1P4-201ENST00000566062 339 ntBASIC1.99□□□□□ -2.09
CMTM3Q96MX0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CMTM3Q96MX0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CMTM3Q96MX0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CMTM3Q96MX0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CMTM3Q96MX0 MIR329-1-201ENST00000385028 80 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CMTM3Q96MX0 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 RNU6-1156P-201ENST00000410365 100 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 RNA5SP184-201ENST00000411071 108 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.98□□□□□ -2.09
CMTM3Q96MX0 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 RNU6-221P-201ENST00000459541 99 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AC026436.1-201ENST00000510537 270 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AC125232.2-201ENST00000592457 143 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AC080078.3-201ENST00000605407 463 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AC126177.8-201ENST00000618339 1015 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
CMTM3Q96MX0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.98□□□□□ -2.09
CMTM3Q96MX0 RNU6-862P-201ENST00000362804 105 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 MIR625-201ENST00000385047 85 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CMTM3Q96MX0 MIR1185-2-201ENST00000408687 86 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.97□□□□□ -2.09
CMTM3Q96MX0 AC009310.1-201ENST00000414414 451 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 MTCO2P27-201ENST00000420740 428 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.97□□□□□ -2.09
CMTM3Q96MX0 AC099677.2-201ENST00000436385 175 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.632-201ENST00000459189 102 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 RNA5SP320-201ENST00000516263 124 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 MIR5094-201ENST00000578766 85 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.15-201ENST00000611544 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.16-201ENST00000613119 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.12-201ENST00000613778 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.20-201ENST00000613956 192 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.9-201ENST00000615427 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.11-201ENST00000616345 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.2-201ENST00000616535 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.3-201ENST00000617785 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.19-201ENST00000618602 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 RNU2-1-201ENST00000618664 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.6-201ENST00000619225 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.5-201ENST00000619465 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 U2.10-201ENST00000620268 191 ntBASIC1.97□□□□□ -2.09
CMTM3Q96MX0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CMTM3Q96MX0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CMTM3Q96MX0 RNU6-1145P-201ENST00000384246 107 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 NDUFB4P4-201ENST00000404822 243 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
CMTM3Q96MX0 Y_RNA.595-201ENST00000410403 105 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 370.8 ms