Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX6-1P78426 GTF3AP2-201ENST00000557014 266 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 7SK.10-201ENST00000621414 298 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX6-1P78426 U6.104-201ENST00000637979 90 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX6-1P78426 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX6-1P78426 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NKX6-1P78426 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NKX6-1P78426 SNORA25B-201ENST00000365507 128 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 SNORD63-201ENST00000384262 68 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 SNORA67.2-201ENST00000384300 149 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 SNORD15B-201ENST00000384714 146 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX6-1P78426 AC005002.2-201ENST00000438228 269 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX6-1P78426 RNU7-26P-201ENST00000458980 63 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 ATP5EP1-201ENST00000510257 156 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 RNU1-143P-201ENST00000516296 146 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 RNU6-667P-201ENST00000517186 102 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 AK6P2-201ENST00000549020 471 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX6-1P78426 MIR3162-201ENST00000581818 82 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 MIR3945-201ENST00000581853 98 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 ELOCP29-201ENST00000588193 334 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 U1.23-201ENST00000610293 146 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 RNU1-68P-201ENST00000615382 146 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 U1.39-201ENST00000621562 146 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 MIR3674-201ENST00000636576 68 ntBASIC2.68□□□□□ -1.98
NKX6-1P78426 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
NKX6-1P78426 AP006437.1-201ENST00000641440 3685 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
NKX6-1P78426 Y_RNA.64-201ENST00000362845 102 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 SNORA54-201ENST00000384281 123 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 RNU6-937P-201ENST00000384325 106 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 Y_RNA.556-201ENST00000384677 113 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NKX6-1P78426 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.67□□□□□ -1.98
NKX6-1P78426 TOMM22P2-201ENST00000430735 237 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 LINC01399-202ENST00000458450 244 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.67□□□□□ -1.98
NKX6-1P78426 AP003733.2-201ENST00000529409 171 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.67□□□□□ -1.98
NKX6-1P78426 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NKX6-1P78426 AC011373.1-201ENST00000607270 237 ntBASIC2.67□□□□□ -1.98
NKX6-1P78426 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NKX6-1P78426 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 RNU6-21P-201ENST00000384710 107 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 SNORD115-46-201ENST00000390982 71 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 RNA5SP504-201ENST00000410676 117 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 OOSP1P1-201ENST00000423265 274 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX6-1P78426 AL137159.1-201ENST00000452808 512 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX6-1P78426 HMGN2P9-201ENST00000476875 229 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 AC025465.3-201ENST00000510570 311 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
NKX6-1P78426 RNU6-948P-201ENST00000516374 107 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 RNA5SP367-201ENST00000516557 118 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 RNU7-110P-201ENST00000516891 62 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX6-1P78426 AL161670.1-201ENST00000554348 137 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 MIR4300-201ENST00000581016 96 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 MIR4435-1-201ENST00000582552 80 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NKX6-1P78426 AL136360.1-201ENST00000503377 1900 ntBASIC2.66□□□□□ -1.98
NKX6-1P78426 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NKX6-1P78426 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
NKX6-1P78426 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.65□□□□□ -1.98
NKX6-1P78426 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NKX6-1P78426 MIR568-201ENST00000385036 95 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 MIR1302-6-201ENST00000408466 90 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 RNU2-20P-201ENST00000410425 191 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.65□□□□□ -1.99
NKX6-1P78426 AC096920.1-201ENST00000423991 241 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 AC016925.1-201ENST00000458303 298 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 RN7SL499P-201ENST00000481141 276 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 AC018868.1-201ENST00000491307 315 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX6-1P78426 SEPT14P8-201ENST00000508026 178 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 RNU6-991P-201ENST00000516168 107 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX6-1P78426 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX6-1P78426 AC136932.1-201ENST00000574771 208 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 AC107871.2-201ENST00000612894 502 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 U4.1-201ENST00000620349 87 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 MIR8062-201ENST00000621515 85 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 IGHVIII-44-202ENST00000636235 289 ntBASIC2.65□□□□□ -1.99
NKX6-1P78426 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NKX6-1P78426 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX6-1P78426 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NKX6-1P78426 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX6-1P78426 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NKX6-1P78426 MIR410-201ENST00000362222 80 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms