Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC087441.2-201ENST00000529141 262 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 MIR5696-201ENST00000578474 85 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 AC005899.2-201ENST00000584353 90 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 SDR42E1P4-201ENST00000620894 481 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 AL133216.2-202ENST00000634512 349 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 ZNF204P-201ENST00000416749 2397 ntBASIC2.16□□□□□ -2.06
TM4SF1P30408 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TM4SF1P30408 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TM4SF1P30408 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.06
TM4SF1P30408 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
TM4SF1P30408 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.15□□□□□ -2.06
TM4SF1P30408 RNU6-280P-201ENST00000364145 104 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 SNORA16.1-201ENST00000364597 132 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 Y_RNA.533-201ENST00000384596 114 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TM4SF1P30408 MIR1276-201ENST00000408707 83 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.15□□□□□ -2.07
TM4SF1P30408 RBMX2P4-201ENST00000441256 376 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 AC245517.4-201ENST00000448601 281 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 RNU1-131P-201ENST00000458943 161 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.15□□□□□ -2.07
TM4SF1P30408 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.15□□□□□ -2.07
TM4SF1P30408 Y_RNA.706-201ENST00000516933 99 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 AC134698.4-201ENST00000523451 826 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.15□□□□□ -2.07
TM4SF1P30408 AC243960.4-201ENST00000600532 288 ntBASIC2.15□□□□□ -2.07
TM4SF1P30408 AC080100.1-201ENST00000624239 5356 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TM4SF1P30408 SNORD115-8-201ENST00000363856 82 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 RNU6-1164P-201ENST00000364428 107 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 SNORD115-38-201ENST00000365037 82 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 RNU6-1050P-201ENST00000410388 107 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 AC139712.2-201ENST00000424302 339 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TM4SF1P30408 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.14□□□□□ -2.07
TM4SF1P30408 AC103851.1-201ENST00000506833 274 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 RNU2-34P-201ENST00000516534 121 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 AL645939.4-201ENST00000604495 135 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 AC100812.1-201ENST00000607622 580 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 AC022306.2-201ENST00000617563 647 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 DUXAP9-208ENST00000622815 614 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 TPTEP1-208ENST00000636884 213 ntBASIC2.14□□□□□ -2.07
TM4SF1P30408 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TM4SF1P30408 ZNF702P-202ENST00000434269 1966 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 RNU6-1059P-201ENST00000363752 98 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.13□□□□□ -2.07
TM4SF1P30408 RNU6-700P-201ENST00000391043 107 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 Y_RNA.594-201ENST00000410373 140 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.13□□□□□ -2.07
TM4SF1P30408 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.13□□□□□ -2.07
TM4SF1P30408 MTCO3P8-201ENST00000453691 755 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.13□□□□□ -2.07
TM4SF1P30408 RPL30P10-201ENST00000488148 337 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 SUMO2P18-201ENST00000518873 252 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.13□□□□□ -2.07
TM4SF1P30408 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.13□□□□□ -2.07
TM4SF1P30408 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.13□□□□□ -2.07
TM4SF1P30408 AC104581.2-201ENST00000572227 430 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
TM4SF1P30408 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TM4SF1P30408 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
TM4SF1P30408 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TM4SF1P30408 Y_RNA.88-201ENST00000363029 99 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 RNU6-595P-201ENST00000363944 107 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 RNA5SP493-201ENST00000364115 91 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 RNU6-392P-201ENST00000364926 101 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 MIR597-201ENST00000384968 97 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 RPL23AP50-201ENST00000434149 455 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 Z82188.1-201ENST00000436709 154 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AC026782.1-201ENST00000512952 449 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 SNORA20.3-201ENST00000516880 132 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.12□□□□□ -2.07
TM4SF1P30408 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.12□□□□□ -2.07
TM4SF1P30408 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.12□□□□□ -2.07
TM4SF1P30408 AC010928.2-201ENST00000588017 287 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AC005786.1-201ENST00000588553 154 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 SNORD11B-201ENST00000607707 90 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AL590240.4-201ENST00000616908 390 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
TM4SF1P30408 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
TM4SF1P30408 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TM4SF1P30408 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.11□□□□□ -2.07
TM4SF1P30408 Y_RNA.184-201ENST00000363884 108 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 RNU6-17P-201ENST00000384245 107 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 RNU6-842P-201ENST00000384269 107 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 RNU6-18P-201ENST00000384527 107 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 AC004965.1-201ENST00000413033 213 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 AC138393.2-201ENST00000414742 246 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 AL353689.1-201ENST00000438895 199 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 AL357134.1-201ENST00000445848 426 ntBASIC2.11□□□□□ -2.07
TM4SF1P30408 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms