Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 AC009487.4-201ENST00000624969 3585 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA60-201ENST00000362396 134 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-147P-201ENST00000383983 107 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 MIR767-201ENST00000390228 109 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 AC006011.1-201ENST00000442758 349 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 RPL39P40-201ENST00000445481 146 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 AC016717.1-201ENST00000448918 286 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 ATP5EP1-201ENST00000510257 156 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 AC097639.2-201ENST00000603159 172 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 CR392039.5-201ENST00000623201 510 ntBASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 SNORD31B-201ENST00000364977 69 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-136P-201ENST00000384663 107 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 MIR181A2-201ENST00000384863 110 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA11.1-201ENST00000408133 129 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 RNA5SP306-201ENST00000411087 107 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 Y_RNA.630-201ENST00000411370 108 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 RNA5SP112-201ENST00000515937 99 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA31.1-201ENST00000515993 133 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA31.5-201ENST00000516190 133 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-1061P-201ENST00000516530 99 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 AC025647.1-201ENST00000517879 253 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 MIR4765-201ENST00000585007 77 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 uc_338.4-201ENST00000616635 176 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 ZNF962P-201ENST00000443465 3140 ntBASIC3.97□□□□□ -1.77
PCDHB11Q9Y5F2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-1274P-201ENST00000384557 107 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 MIR7-3-201ENST00000384898 110 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 AL603914.1-201ENST00000401964 204 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD77.4-201ENST00000516158 81 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-948P-201ENST00000516374 107 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 MIR5684-201ENST00000585074 65 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 AL929325.1-201ENST00000603096 117 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 AC096577.2-201ENST00000611455 153 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 MIR7151-201ENST00000617477 60 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 MIR6500-201ENST00000622700 86 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB11Q9Y5F2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RNU1-105P-201ENST00000363470 161 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 SNORD35B-201ENST00000363660 87 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-944P-201ENST00000364023 107 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 Y_RNA.309-201ENST00000365046 111 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 MIR449B-201ENST00000384995 97 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 SNORA3C-201ENST00000408792 125 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RNU2-70P-201ENST00000410718 179 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RNA5SP39-201ENST00000411245 120 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AC008134.1-201ENST00000420943 193 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RNU6-498P-201ENST00000459468 107 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AC025627.2-201ENST00000576220 160 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 RN7SL703P-201ENST00000578485 302 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 MIR2681-201ENST00000581814 105 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 MAPK10-253ENST00000641010 4072 ntBASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB11Q9Y5F2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB11Q9Y5F2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms