Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC068205.3-201ENST00000636385 468 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.263-201ENST00000364659 114 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 SNORA48.1-201ENST00000390879 135 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 RNA5SP213-201ENST00000391031 106 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 RNA5SP504-201ENST00000410676 117 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AL135938.1-201ENST00000443141 297 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC096638.1-201ENST00000444678 216 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC016717.1-201ENST00000448918 286 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.653-201ENST00000459091 95 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.04□□□□□ -2.08
CMTM3Q96MX0 RNU6-507P-201ENST00000516045 100 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 RNU1-117P-201ENST00000517041 158 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AP002770.2-201ENST00000543613 532 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC079600.2-201ENST00000550076 130 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC004584.2-201ENST00000570407 410 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC090617.3-201ENST00000573670 475 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 MIR5695-201ENST00000579717 85 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC083806.3-201ENST00000614016 455 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC092608.2-201ENST00000624427 218 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 AC022513.1-201ENST00000624512 117 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 MIR1291-201ENST00000627649 87 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 MIR1302-1-201ENST00000637932 143 ntBASIC2.04□□□□□ -2.08
CMTM3Q96MX0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CMTM3Q96MX0 RNU6-222P-201ENST00000362438 107 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 RNU6-859P-201ENST00000362728 107 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 MTCYBP4-201ENST00000401524 249 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 RNU6-1304P-201ENST00000411374 106 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.03□□□□□ -2.08
CMTM3Q96MX0 AC107083.1-201ENST00000439643 279 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.03□□□□□ -2.08
CMTM3Q96MX0 RNU7-57P-201ENST00000459540 60 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 AP001486.1-201ENST00000463339 476 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 AC091179.3-201ENST00000474761 144 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 RNU6-264P-201ENST00000517134 104 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 SUMO2P18-201ENST00000518873 252 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 AC010999.1-201ENST00000611856 324 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 AC006386.2-201ENST00000624491 75 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 AC012005.1-201ENST00000624575 75 ntBASIC2.03□□□□□ -2.08
CMTM3Q96MX0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.03□□□□□ -2.08
CMTM3Q96MX0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CMTM3Q96MX0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
CMTM3Q96MX0 RNU6-874P-201ENST00000362390 105 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.70-201ENST00000362886 110 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 RNU6-727P-201ENST00000363592 107 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 SNORA8-201ENST00000384574 139 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 MIR196B-201ENST00000384852 84 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 AL359511.1-201ENST00000402970 211 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 EIF1P2-201ENST00000428233 350 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 AC092423.1-201ENST00000430165 186 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 MTATP6P23-201ENST00000440153 476 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 RPL30P15-201ENST00000457129 321 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 RNU7-87P-201ENST00000459343 62 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 SUB1P3-201ENST00000564581 315 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.02□□□□□ -2.09
CMTM3Q96MX0 AC013412.1-201ENST00000610687 192 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 AC133104.2-201ENST00000615272 193 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.02□□□□□ -2.09
CMTM3Q96MX0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CMTM3Q96MX0 AC245060.5-201ENST00000610778 3293 ntBASIC2.02□□□□□ -2.09
CMTM3Q96MX0 RNU6-99P-201ENST00000364721 107 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 RNU6-890P-201ENST00000384121 107 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.557-201ENST00000384680 107 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.577-201ENST00000384794 101 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AC025750.2-201ENST00000442609 450 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.01□□□□□ -2.09
CMTM3Q96MX0 UBE2V1P7-201ENST00000446395 340 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
CMTM3Q96MX0 MTCO3P10-201ENST00000455912 772 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 RNU6-470P-201ENST00000515954 104 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AC093023.1-201ENST00000547375 507 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 GTF3AP2-201ENST00000557014 266 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 AL355375.2-201ENST00000574825 175 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 MZT1P2-201ENST00000604387 248 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.01□□□□□ -2.09
CMTM3Q96MX0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 MTND4LP32-201ENST00000636111 270 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
CMTM3Q96MX0 MTND5P35-201ENST00000557537 1720 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2□□□□□ -2.09
CMTM3Q96MX0 U3.8-201ENST00000363675 217 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 SNORA5B-201ENST00000363786 132 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.259-201ENST00000364619 101 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 SNORD87-201ENST00000364849 89 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.356-201ENST00000365475 113 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.415-201ENST00000384012 112 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 Y_RNA.529-201ENST00000384586 119 ntBASIC2□□□□□ -2.09
CMTM3Q96MX0 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms