Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIR5695-201ENST00000579717 85 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 MIR3941-201ENST00000582572 103 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 MIR98-201ENST00000606724 119 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC005562.2-201ENST00000618264 111 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC068647.2-201ENST00000637380 353 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LRRC28Q86X40 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 RNU6-17P-201ENST00000384245 107 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 RNU6-18P-201ENST00000384527 107 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 SNORA40.3-201ENST00000390964 122 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 RNU6-1093P-201ENST00000391194 107 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 RNU6-903P-201ENST00000391270 109 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 RNU2-29P-201ENST00000410423 189 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 COX6CP10-201ENST00000416832 224 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 AL031667.1-201ENST00000440222 725 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 snoU13.6-201ENST00000458785 104 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 snoU13.18-201ENST00000459483 104 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 RPS26P45-201ENST00000471748 340 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC117454.1-201ENST00000491120 168 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 HMGN1P12-201ENST00000499125 195 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 MTND1P22-201ENST00000510572 951 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 RPL39P5-202ENST00000512505 151 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC024995.1-201ENST00000523014 93 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC008088.1-201ENST00000580993 280 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC068790.2-201ENST00000602601 557 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AL929325.1-201ENST00000603096 117 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
LRRC28Q86X40 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC28Q86X40 RNA5SP109-201ENST00000391010 116 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 CETN4P-201ENST00000432407 469 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC009237.7-201ENST00000447357 229 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 AL033528.1-201ENST00000453780 140 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 RNU7-180P-201ENST00000459240 63 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC105417.1-201ENST00000514691 285 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 RNU6-948P-201ENST00000516374 107 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AL137161.1-201ENST00000532231 390 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC245014.2-201ENST00000603689 287 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC022217.4-201ENST00000604389 163 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC28Q86X40 Z84480.1-201ENST00000605131 311 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC246785.4-201ENST00000605374 287 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 AC009161.2-201ENST00000624626 138 ntBASIC0.58□□□□□ -2.32
LRRC28Q86X40 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU6-181P-201ENST00000363225 107 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 Y_RNA.354-201ENST00000365448 111 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 Y_RNA.560-201ENST00000384689 102 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU6-1031P-201ENST00000384773 107 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 MIR586-201ENST00000385035 97 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 SNORD73A-201ENST00000386062 65 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNA5SP467-201ENST00000391274 118 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU6-1054P-201ENST00000411293 104 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC114482.1-201ENST00000418010 247 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC090960.1-201ENST00000421072 306 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC133104.1-201ENST00000429100 218 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC004386.2-201ENST00000441858 148 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 NFU1P2-201ENST00000448700 469 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AL356010.1-201ENST00000456364 102 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC007215.1-201ENST00000464893 276 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.57□□□□□ -2.32
LRRC28Q86X40 CCDC34P1-201ENST00000507441 517 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU6-759P-201ENST00000516740 103 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU6-445P-201ENST00000516949 107 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU7-128P-201ENST00000517247 62 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC069113.1-201ENST00000517763 267 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC026470.2-201ENST00000561492 181 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.57□□□□□ -2.32
LRRC28Q86X40 MIR4753-201ENST00000585119 83 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC025449.1-201ENST00000603896 529 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 RNU6-85P-201ENST00000605989 107 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 TCL6_2.1-201ENST00000615162 119 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 AC008873.1-201ENST00000625051 138 ntBASIC0.57□□□□□ -2.32
LRRC28Q86X40 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.57□□□□□ -2.32
LRRC28Q86X40 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
LRRC28Q86X40 Y_RNA.159-201ENST00000363674 87 ntBASIC0.56□□□□□ -2.32
LRRC28Q86X40 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
LRRC28Q86X40 RNA5SP259-201ENST00000365541 109 ntBASIC0.56□□□□□ -2.32
LRRC28Q86X40 RNU6-417P-201ENST00000384712 107 ntBASIC0.56□□□□□ -2.32
LRRC28Q86X40 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.56□□□□□ -2.32
LRRC28Q86X40 RNA5SP504-201ENST00000410676 117 ntBASIC0.56□□□□□ -2.32
LRRC28Q86X40 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms