Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RNU6-26P-201ENST00000383985 107 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 SNORD63-201ENST00000384262 68 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 Y_RNA.462-201ENST00000384268 102 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 MIR1294-201ENST00000408503 142 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 AC004386.2-201ENST00000441858 148 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 DYNLT3P2-201ENST00000442517 295 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 AC108938.1-201ENST00000451204 136 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 RNY3P15-201ENST00000516297 97 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 AL161670.1-201ENST00000554348 137 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 MYL12BP1-201ENST00000569826 507 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 MIR4513-201ENST00000581077 86 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 AC023043.3-201ENST00000593113 385 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 MIR8062-201ENST00000621515 85 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 LINC02555-201ENST00000563933 1951 ntBASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
PTCHD3Q3KNS1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 Y_RNA.19-201ENST00000362462 99 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 SNORA18.2-201ENST00000383865 132 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL079342.1-201ENST00000401460 267 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL445305.1-201ENST00000432577 575 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL161788.1-201ENST00000441805 169 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 IPO7P1-201ENST00000442031 636 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 LINC01399-202ENST00000458450 244 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AC091179.3-201ENST00000474761 144 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 RPL26P26-201ENST00000480251 434 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 SNORA40.9-201ENST00000515895 93 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 RNU6-397P-201ENST00000516226 104 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 MIR5006-201ENST00000583027 110 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL356280.1-201ENST00000603614 379 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 MZT1P2-201ENST00000604387 248 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL449363.1-201ENST00000617815 186 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 AL136360.1-201ENST00000503377 1900 ntBASIC2.66□□□□□ -1.98
PTCHD3Q3KNS1 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 AC062016.1-201ENST00000355719 319 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 RNU6-713P-201ENST00000384761 107 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 MIR549A-201ENST00000385268 96 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 SNORD115-46-201ENST00000390982 71 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 SNORA12-201ENST00000391162 147 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 FO393413.1-201ENST00000402892 195 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 RNU2-52P-201ENST00000410680 190 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 RNA5SP184-201ENST00000411071 108 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 IFNA11P-201ENST00000446352 526 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 SNORD109B-201ENST00000458961 67 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 SNORD109A-201ENST00000459128 67 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 RPS23P5-201ENST00000495419 428 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 DEFB131C-201ENST00000528817 165 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 AC023824.2-201ENST00000566185 400 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 MIR3149-201ENST00000584629 83 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCHD3Q3KNS1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 Y_RNA.193-201ENST00000363979 102 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 Y_RNA.230-201ENST00000364348 109 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 MIR627-201ENST00000384979 97 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 RNU5A-5P-201ENST00000411054 116 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AC003685.2-201ENST00000422795 395 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AL109933.2-201ENST00000452651 260 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AC090515.1-201ENST00000465295 476 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AK6P2-201ENST00000549020 471 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 SNORD11B-201ENST00000607707 90 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AC011476.5-201ENST00000615594 130 ntBASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCHD3Q3KNS1 U6.104-201ENST00000637979 90 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms