Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
NKX6-1P78426 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NKX6-1P78426 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NKX6-1P78426 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX6-1P78426 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NKX6-1P78426 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX6-1P78426 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX6-1P78426 Y_RNA.19-201ENST00000362462 99 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 Y_RNA.214-201ENST00000364201 112 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 RNU6-1305P-201ENST00000364353 104 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 U8.9-201ENST00000365667 134 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 Y_RNA.415-201ENST00000384012 112 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 RPL21P1-201ENST00000399532 476 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 AC004866.1-201ENST00000411748 78 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 ELOCP20-201ENST00000422460 345 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 MTCYBP9-201ENST00000431021 303 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX6-1P78426 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 AC114982.1-201ENST00000469402 321 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX6-1P78426 SCARNA20.6-201ENST00000517251 106 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX6-1P78426 AC013412.1-201ENST00000610687 192 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 AL357075.2-201ENST00000614906 189 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX6-1P78426 MIR622-201ENST00000638396 96 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 LINC02555-201ENST00000563933 1951 ntBASIC2.72□□□□□ -1.97
NKX6-1P78426 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
NKX6-1P78426 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
NKX6-1P78426 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NKX6-1P78426 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NKX6-1P78426 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX6-1P78426 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NKX6-1P78426 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
NKX6-1P78426 AC093831.2-201ENST00000624393 3427 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 Y_RNA.143-201ENST00000363520 106 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 RNU6-743P-201ENST00000364151 106 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 Y_RNA.462-201ENST00000384268 102 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 RNU6-196P-201ENST00000384315 107 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 MIR586-201ENST00000385035 97 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 RNA5SP475-201ENST00000410568 110 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 RNU5A-5P-201ENST00000411054 116 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 RNU6-130P-201ENST00000411112 103 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX6-1P78426 AL390729.2-201ENST00000416137 156 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 AC009238.1-201ENST00000442165 424 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 DYNLT3P2-201ENST00000442517 295 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 AC009237.6-201ENST00000446969 424 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX6-1P78426 RNA5SP217-201ENST00000515959 91 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.71□□□□□ -1.98
NKX6-1P78426 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX6-1P78426 UBL5P2-201ENST00000583788 219 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 MIR6715A-201ENST00000615929 79 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 MIR376A1-201ENST00000616574 68 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 MIR1248-201ENST00000629190 106 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.71□□□□□ -1.98
NKX6-1P78426 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NKX6-1P78426 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX6-1P78426 RNU6-626P-201ENST00000363354 107 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 Y_RNA.144-201ENST00000363521 113 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 SNORA38-201ENST00000363946 132 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 Y_RNA.230-201ENST00000364348 109 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 SNORD87-201ENST00000364849 89 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 SNORD31B-201ENST00000364977 69 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 SNORA72.2-201ENST00000365028 127 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 MIR1283-1-201ENST00000408494 87 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX6-1P78426 IPO7P1-201ENST00000442031 636 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 NDUFB4P10-201ENST00000452541 359 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 RPL26P26-201ENST00000480251 434 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 RNA5SP356-201ENST00000515972 94 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 RNA5SP490-201ENST00000517141 136 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX6-1P78426 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX6-1P78426 AC005176.2-201ENST00000596933 147 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 AC008873.1-201ENST00000625051 138 ntBASIC2.7□□□□□ -1.98
NKX6-1P78426 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX6-1P78426 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX6-1P78426 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NKX6-1P78426 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX6-1P78426 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX6-1P78426 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NKX6-1P78426 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NKX6-1P78426 RNU6-545P-201ENST00000362681 104 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 U3.8-201ENST00000363675 217 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 RNU6-961P-201ENST00000363893 105 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 RNU6-1264P-201ENST00000383891 107 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 RNU6-20P-201ENST00000384106 107 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 RNU6-463P-201ENST00000384340 107 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 ELOCP21-201ENST00000412558 336 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX6-1P78426 AL139281.1-201ENST00000422120 335 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 RAB28P5-201ENST00000427490 651 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX6-1P78426 HMGN2P18-201ENST00000450680 270 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 UQCRHP3-201ENST00000451503 251 ntBASIC2.69□□□□□ -1.98
NKX6-1P78426 AC117440.1-201ENST00000474107 571 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms