Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL358176.2-201ENST00000425769 204 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 AL109933.2-201ENST00000452651 260 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 RNU7-14P-201ENST00000459331 62 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 SNORA40.9-201ENST00000515895 93 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 RNU6-1098P-201ENST00000516772 96 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHGA12O60330 AC023043.3-201ENST00000593113 385 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 MZT1P2-201ENST00000604387 248 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.89□□□□□ -1.95
PCDHGA12O60330 RNU4-82P-201ENST00000362443 140 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 SNORD31B-201ENST00000364977 69 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 Y_RNA.462-201ENST00000384268 102 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 MIR586-201ENST00000385035 97 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 MIR549A-201ENST00000385268 96 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 AC087499.2-201ENST00000432861 149 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 AC108938.1-201ENST00000451204 136 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 MRPS35P2-201ENST00000508242 191 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 RRN3P3-201ENST00000549207 578 ntBASIC2.88□□□□□ -1.95
PCDHGA12O60330 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA12O60330 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA12O60330 Y_RNA.230-201ENST00000364348 109 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 SNORA9.2-201ENST00000365361 133 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 RNU6-438P-201ENST00000365561 103 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 RNU6-1105P-201ENST00000384774 107 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 MIR1302-3-201ENST00000408128 138 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 RNU5A-5P-201ENST00000411054 116 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 BMS1P22-201ENST00000414726 313 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC009238.1-201ENST00000442165 424 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC009237.6-201ENST00000446969 424 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 AP004217.1-201ENST00000480579 346 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 DEFB131C-201ENST00000528817 165 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 MIR4753-201ENST00000585119 83 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC008873.1-201ENST00000625051 138 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 IGHVIII-44-202ENST00000636235 289 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA12O60330 AC009487.4-201ENST00000624969 3585 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.87□□□□□ -1.95
PCDHGA12O60330 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHGA12O60330 AC135776.4-201ENST00000624300 1904 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHGA12O60330 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 Y_RNA.210-201ENST00000364161 110 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 RNU6-1109P-201ENST00000391187 107 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 MIR548F4-201ENST00000408515 105 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHGA12O60330 MTND3P2-201ENST00000438452 342 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHGA12O60330 RN7SL20P-201ENST00000488827 297 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHGA12O60330 AC018448.1-201ENST00000552843 316 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 AC008269.2-201ENST00000561915 1105 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 U6.104-201ENST00000637979 90 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA12O60330 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA12O60330 AP006437.1-201ENST00000641440 3685 ntBASIC2.86□□□□□ -1.95
PCDHGA12O60330 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA12O60330 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNU1-23P-201ENST00000363361 144 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNU6-770P-201ENST00000363929 105 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNU6-926P-201ENST00000384075 107 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 SNORD63-201ENST00000384262 68 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 OOSP1P1-201ENST00000423265 274 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 AL731563.1-201ENST00000442202 214 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNU6-625P-201ENST00000459412 107 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 AC010655.3-201ENST00000478818 450 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA12O60330 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNU6-635P-201ENST00000516651 102 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 RNU6-897P-201ENST00000517135 105 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA12O60330 AC007536.1-201ENST00000533382 349 ntBASIC2.85□□□□□ -1.95
PCDHGA12O60330 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms