Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 U8.1-201ENST00000362843 134 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AC004552.1-201ENST00000419089 348 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 Z98742.2-201ENST00000431564 187 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AC090515.1-201ENST00000465295 476 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AC090543.2-201ENST00000483963 348 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-1299P-201ENST00000516316 100 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 MIR3944-201ENST00000581277 108 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AC006504.1-201ENST00000562493 3666 ntBASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
PCDHB11Q9Y5F2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 DYNLT3P1-201ENST00000378574 347 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA22-201ENST00000383907 134 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 MIR1294-201ENST00000408503 142 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-57P-201ENST00000411348 103 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA71B-202ENST00000439232 272 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 RPS29P7-201ENST00000439662 171 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 AC008155.2-201ENST00000464337 397 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-63P-201ENST00000516690 95 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 AC090517.3-201ENST00000625170 141 ntBASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHB11Q9Y5F2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AC138915.1-201ENST00000565427 1685 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 MTND5P32-201ENST00000560711 1802 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 HMGN2P8-201ENST00000391458 268 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AL353705.1-201ENST00000433468 480 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AC010531.2-201ENST00000465012 153 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 MIR449C-201ENST00000516047 92 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 RNA5SP309-201ENST00000516670 106 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AC027419.1-201ENST00000522976 328 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AL049861.1-201ENST00000603130 150 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 AC006111.3-201ENST00000622137 383 ntBASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB11Q9Y5F2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC063976.4-201ENST00000421971 163 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC083906.5-201ENST00000503722 328 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 SNORD33.1-201ENST00000516213 88 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 RNA5SP153-201ENST00000516498 76 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 RNA5SP143-201ENST00000516936 115 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC015720.1-201ENST00000565251 277 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 MIR5685-201ENST00000579080 79 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC103810.1-201ENST00000579873 453 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC131055.1-201ENST00000584626 316 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC108081.1-201ENST00000604358 221 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 AC006435.5-201ENST00000624486 112 ntBASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHB11Q9Y5F2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 Y_RNA.114-201ENST00000363265 113 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-1255P-201ENST00000363434 112 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 RNU4-13P-201ENST00000364019 141 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-234P-201ENST00000365229 104 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 RNU6-117P-201ENST00000365415 107 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 SNORA72-201ENST00000384339 132 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 RNA5SP511-201ENST00000410487 115 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 MLLT10P1-201ENST00000418346 262 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 snoU13.22-201ENST00000459428 104 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 PPIAP15-201ENST00000479662 484 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC109329.2-201ENST00000519658 482 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC133485.4-201ENST00000561835 220 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC138907.4-201ENST00000570107 226 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 MIR4444-1-201ENST00000581696 74 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 MIR4444-2-201ENST00000584390 74 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AL670379.3-201ENST00000605040 251 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 AC016588.2-201ENST00000632484 3021 ntBASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
PCDHB11Q9Y5F2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB11Q9Y5F2 Z82209.1-201ENST00000422141 2135 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 1682.1 ms