Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.09□□□□□ -2.08
CMTM3Q96MX0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU1-51P-201ENST00000365345 176 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU6-418P-201ENST00000384035 107 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 SNORA44-201ENST00000384584 132 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 MIR10B-201ENST00000385011 110 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 MIR27B-201ENST00000385129 97 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 MIR190B-201ENST00000401119 79 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AL353997.1-201ENST00000432936 108 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RPL23AP50-201ENST00000434149 455 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AC097473.1-201ENST00000508142 408 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AC008549.1-201ENST00000512900 643 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU6-559P-201ENST00000516151 98 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU6-277P-201ENST00000516272 106 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 RNU2-34P-201ENST00000516534 121 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 APOOP3-201ENST00000536787 586 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.08□□□□□ -2.08
CMTM3Q96MX0 AL132765.2-201ENST00000610812 351 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.106-201ENST00000363189 100 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.387-201ENST00000383918 102 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 RNU6-975P-201ENST00000384296 105 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 SNORA48.2-201ENST00000390926 124 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 RNU1-139P-201ENST00000391307 165 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AL445305.1-201ENST00000432577 575 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 RPL17P19-201ENST00000489069 552 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.07□□□□□ -2.08
CMTM3Q96MX0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC093303.1-201ENST00000514549 295 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.07□□□□□ -2.08
CMTM3Q96MX0 MIR4287-201ENST00000579398 78 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC005786.1-201ENST00000588553 154 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 SNORD11B-201ENST00000607707 90 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC104260.1-201ENST00000616660 539 ntBASIC2.07□□□□□ -2.08
CMTM3Q96MX0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.07□□□□□ -2.08
CMTM3Q96MX0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 RNU6-301P-201ENST00000384277 107 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 RNU6-310P-201ENST00000384655 107 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 RNU6-1009P-201ENST00000390996 107 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.646-201ENST00000410980 101 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 RNA5SP501-201ENST00000410990 112 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 Z92545.1-201ENST00000411782 234 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 USP9YP16-201ENST00000430287 407 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AC093019.1-201ENST00000443135 252 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AC074290.1-201ENST00000448883 135 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 USP9YP23-201ENST00000455085 407 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AL049873.1-201ENST00000480540 376 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 FGF7P4-201ENST00000509595 295 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.702-201ENST00000516843 96 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 FRG2DP-202ENST00000566967 323 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AC005000.2-201ENST00000605468 310 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 MIR7106-201ENST00000612419 65 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AC008873.1-201ENST00000625051 138 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 AL159152.1-201ENST00000635019 2587 ntBASIC2.06□□□□□ -2.08
CMTM3Q96MX0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CMTM3Q96MX0 MTND5P16-201ENST00000460269 1703 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.364-201ENST00000365532 101 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 Y_RNA.384-201ENST00000383909 102 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RNU6-281P-201ENST00000384212 103 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RNU6-793P-201ENST00000384233 104 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RNU6-1297P-201ENST00000384415 104 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 SNORA75.6-201ENST00000391318 127 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AL033519.2-201ENST00000403958 392 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AC007098.1-201ENST00000420122 367 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AC105272.1-201ENST00000438604 198 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RNU6-498P-201ENST00000459468 107 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RN7SL636P-201ENST00000497504 294 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 RNU6-856P-201ENST00000516959 98 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.05□□□□□ -2.08
CMTM3Q96MX0 LARP7P3-201ENST00000579888 337 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
CMTM3Q96MX0 AL078596.1-201ENST00000624856 447 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms