Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC009094.1-201ENST00000564443 426 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC090616.2-202ENST00000584248 222 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AL390123.1-201ENST00000603216 237 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC011458.1-201ENST00000604034 617 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AL022345.2-201ENST00000606307 135 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 MIR6734-201ENST00000621166 68 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 U6.108-201ENST00000637764 58 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LRRC28Q86X40 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 RNU6-1123P-201ENST00000362347 106 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 snoU2-30.2-201ENST00000362805 70 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU5B-2P-201ENST00000363036 113 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU5F-7P-201ENST00000363696 115 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 Y_RNA.796-201ENST00000364268 102 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 Y_RNA.269-201ENST00000364685 89 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 Y_RNA.287-201ENST00000364853 94 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 Y_RNA.799-201ENST00000364992 102 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU6-282P-201ENST00000365357 103 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU6-1026P-201ENST00000384465 108 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU6-1235P-201ENST00000384559 107 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU6-606P-201ENST00000384721 111 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 MIR19B1-201ENST00000384829 87 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 MIR300-201ENST00000401138 83 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RPS26P42-201ENST00000413485 326 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 CYCSP46-201ENST00000423569 204 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 AL606517.2-201ENST00000442855 241 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 RNU6-498P-201ENST00000459468 107 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC010486.2-201ENST00000505572 483 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC016957.1-201ENST00000534895 309 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 MIR3682-201ENST00000581338 84 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 RSL24D1P11-201ENST00000591045 491 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 BNIP3P39-201ENST00000601077 554 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC021506.2-201ENST00000612354 169 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 AC016597.2-201ENST00000613256 341 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 AP001506.1-201ENST00000615444 211 ntBASIC0.62□□□□□ -2.31
LRRC28Q86X40 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.62□□□□□ -2.31
LRRC28Q86X40 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
LRRC28Q86X40 RNU4-21P-201ENST00000362802 126 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 Y_RNA.132-201ENST00000363421 102 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 SNORA72.2-201ENST00000365028 127 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 RNU6-975P-201ENST00000384296 105 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 Y_RNA.508-201ENST00000384502 114 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AL031577.2-201ENST00000404133 280 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.61□□□□□ -2.31
LRRC28Q86X40 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.61□□□□□ -2.31
LRRC28Q86X40 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.61□□□□□ -2.31
LRRC28Q86X40 MTCO2P3-201ENST00000442543 421 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
LRRC28Q86X40 RNU7-167P-201ENST00000459160 62 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 SNORD42A-201ENST00000459584 64 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 RPL39P38-201ENST00000467018 153 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC079140.5-201ENST00000507882 310 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 SNORA31.10-201ENST00000516482 106 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 RN7SKP88-201ENST00000516847 250 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.61□□□□□ -2.31
LRRC28Q86X40 MIR4709-201ENST00000577272 72 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 MIR5583-1-201ENST00000580941 59 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC104458.1-201ENST00000608243 463 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 7SK.8-201ENST00000612110 250 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC040896.1-201ENST00000613819 479 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 7SK.11-201ENST00000615477 250 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.61□□□□□ -2.31
LRRC28Q86X40 7SK.13-201ENST00000622040 250 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC139792.3-201ENST00000623525 224 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 AC079248.2-201ENST00000623779 326 ntBASIC0.61□□□□□ -2.31
LRRC28Q86X40 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LRRC28Q86X40 RNU6-553P-201ENST00000364047 96 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 SNORA67.2-201ENST00000384300 149 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC016909.1-201ENST00000415916 166 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.6□□□□□ -2.31
LRRC28Q86X40 RAB28P5-201ENST00000427490 651 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC016717.1-201ENST00000448918 286 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.6□□□□□ -2.31
LRRC28Q86X40 RN7SKP49-201ENST00000516675 260 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 CYCSP23-201ENST00000519781 313 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 RNU6-323P-201ENST00000521915 107 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC133485.1-201ENST00000567176 124 ntBASIC0.6□□□□□ -2.31
LRRC28Q86X40 AC138907.6-201ENST00000568401 126 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms