Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC008267.5-201ENST00000424928 265 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC13P31276 RPL23AP49-201ENST00000492925 468 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC13P31276 RNU6-548P-201ENST00000517083 115 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC13P31276 OR11H5P-201ENST00000554039 926 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC13P31276 AC100812.1-201ENST00000607622 580 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AL138726.1-201ENST00000614873 333 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AC098657.3-201ENST00000620434 263 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HOXC13P31276 AC091812.1-201ENST00000432235 1948 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-78P-201ENST00000362897 107 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-1159P-201ENST00000362933 107 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.396-201ENST00000383949 103 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.480-201ENST00000384364 102 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.489-201ENST00000384410 101 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.556-201ENST00000384677 113 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-1109P-201ENST00000391187 107 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 U3.40-201ENST00000408706 208 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-1050P-201ENST00000410388 107 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 AL590632.1-201ENST00000424289 371 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC13P31276 AC018634.1-201ENST00000437554 401 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC13P31276 HMGN2P23-201ENST00000456759 269 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 SCARNA18-201ENST00000459004 134 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-470P-201ENST00000515954 104 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-189P-201ENST00000516120 101 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.668-201ENST00000516233 93 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.670-201ENST00000516255 105 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 RNU6-1016P-201ENST00000516689 94 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 Y_RNA.721-201ENST00000517207 102 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 MIR1273D-201ENST00000577266 86 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 AC090897.2-201ENST00000581715 130 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC13P31276 AC005592.1-201ENST00000566527 1640 ntBASIC2.41□□□□□ -2.02
HOXC13P31276 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
HOXC13P31276 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
HOXC13P31276 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.4□□□□□ -2.03
HOXC13P31276 RNU6-562P-201ENST00000362731 107 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 RNU6-82P-201ENST00000363970 107 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 SNORA25B-201ENST00000365507 128 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 Y_RNA.447-201ENST00000384184 113 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 AL512604.1-201ENST00000404812 257 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 MIR548I3-201ENST00000408378 149 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 MIR548I1-201ENST00000408810 149 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 Y_RNA.594-201ENST00000410373 140 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 RNU2-23P-201ENST00000410545 195 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC13P31276 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC13P31276 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC13P31276 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC13P31276 Y_RNA.708-201ENST00000516950 96 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 AC023442.1-201ENST00000531247 422 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 DEFB122-202ENST00000569013 197 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HOXC13P31276 AL031274.2-201ENST00000599419 203 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 AC092447.9-201ENST00000603395 144 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 AL713866.2-201ENST00000603579 219 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 AC091932.3-201ENST00000624223 323 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC13P31276 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC13P31276 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC13P31276 AC002543.1-201ENST00000299783 1954 ntBASIC2.4□□□□□ -2.03
HOXC13P31276 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-37P-201ENST00000362692 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-655P-201ENST00000362858 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-11P-201ENST00000364234 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-25P-201ENST00000383873 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-1-201ENST00000383898 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 Y_RNA.428-201ENST00000384078 102 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-48P-201ENST00000384161 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-36P-201ENST00000384172 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-4P-201ENST00000384205 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-5P-201ENST00000384238 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-3P-201ENST00000384314 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-16P-201ENST00000384385 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-15P-201ENST00000384534 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-306P-201ENST00000384617 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-2-201ENST00000384627 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-29P-201ENST00000384637 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-9-201ENST00000384776 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-33P-201ENST00000384793 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 SNORA75.6-201ENST00000391318 127 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-101P-201ENST00000410323 104 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 SNAP23P1-201ENST00000433229 246 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 DYNLT3P2-201ENST00000442517 295 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 AC022493.2-201ENST00000506122 481 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 AC116337.1-201ENST00000509680 687 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-377P-201ENST00000515965 102 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNY3P15-201ENST00000516297 97 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 SNORD116.3-201ENST00000517176 78 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-586P-201ENST00000517265 104 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms