Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 Y_RNA.280-201ENST00000364765 112 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP104-201ENST00000410989 118 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 AC016925.1-201ENST00000458303 298 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 RN7SL542P-201ENST00000467147 294 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 RN7SL585P-201ENST00000470538 280 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 SNORA31.21-201ENST00000517180 77 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 AL160236.1-201ENST00000556317 195 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 MIR4753-201ENST00000585119 83 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 MIR6867-201ENST00000610636 67 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC007256.1-201ENST00000392253 2765 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP267-201ENST00000364893 126 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-1336P-201ENST00000383886 109 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-484P-201ENST00000384016 107 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 Y_RNA.432-201ENST00000384087 111 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 SNORA40.5-201ENST00000391061 128 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP252-201ENST00000391131 119 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RPL21P65-201ENST00000406094 466 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 HMGN2P31-201ENST00000432430 273 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-221P-201ENST00000459541 99 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC146944.2-203ENST00000502493 354 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC139495.1-202ENST00000513164 354 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RNU5E-3P-201ENST00000515913 68 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 Y_RNA.692-201ENST00000516627 105 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 MIR3613-201ENST00000579844 87 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 RPL30P11-203ENST00000598995 310 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 AC008739.3-201ENST00000603262 127 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 MIR6075-201ENST00000620782 95 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHB11Q9Y5F2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 Y_RNA.120-201ENST00000363304 110 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP130-201ENST00000364431 114 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 SNORD14D-201ENST00000384390 87 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP171-201ENST00000391071 115 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 CYCSP19-201ENST00000411715 316 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RNU7-14P-201ENST00000459331 62 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP20-201ENST00000515976 84 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 MIR3121-201ENST00000579680 77 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 RN7SL600P-201ENST00000581811 299 ntBASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB11Q9Y5F2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-1080P-201ENST00000383982 107 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-975P-201ENST00000384296 105 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 AL158147.1-201ENST00000443970 75 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP246-201ENST00000458909 119 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 RNA5SP170-201ENST00000517150 101 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 MIR4679-2-201ENST00000578358 77 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 AL606490.9-201ENST00000603331 271 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 Z82217.1-201ENST00000625157 8149 ntBASIC4.04□□□□□ -1.76
PCDHB11Q9Y5F2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB11Q9Y5F2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms