Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC069257.2-201ENST00000441819 155 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC073910.1-201ENST00000445047 438 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 RPS4XP11-201ENST00000446897 772 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC132479.1-201ENST00000449160 144 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 C1DP4-201ENST00000455429 424 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.66□□□□□ -2.3
LRRC28Q86X40 RPS29P15-201ENST00000458329 171 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 GMFBP1-201ENST00000467831 427 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.66□□□□□ -2.3
LRRC28Q86X40 AP001372.4-201ENST00000524889 472 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC090517.1-201ENST00000569307 266 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 MIR151B-201ENST00000584249 96 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC016727.2-201ENST00000603988 621 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC064807.4-201ENST00000607201 407 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC008250.2-201ENST00000615261 205 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AL136221.1-201ENST00000621449 509 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 U6.114-201ENST00000636407 96 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC068700.1-201ENST00000565862 3754 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
LRRC28Q86X40 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-545P-201ENST00000362681 104 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-562P-201ENST00000362731 107 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-877P-201ENST00000383868 107 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-418P-201ENST00000384035 107 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-434P-201ENST00000384376 107 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-331P-201ENST00000384724 107 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 SNORD70.1-201ENST00000391007 85 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU2-7P-201ENST00000410794 178 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 AC012306.1-201ENST00000423267 114 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC28Q86X40 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC28Q86X40 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 USP9YP28-201ENST00000435142 589 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 NDUFA5P4-201ENST00000436704 385 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC28Q86X40 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.65□□□□□ -2.31
LRRC28Q86X40 AL163973.1-201ENST00000484753 577 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RPS23P5-201ENST00000495419 428 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU2-34P-201ENST00000516534 121 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 RNU6-567P-201ENST00000516746 107 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.65□□□□□ -2.31
LRRC28Q86X40 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC28Q86X40 TPRKBP2-201ENST00000565969 475 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 TMF1P1-201ENST00000576058 373 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 BX284668.6-201ENST00000606899 438 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 uc_338.11-201ENST00000619132 160 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 SEPT14P19-203ENST00000633205 211 ntBASIC0.65□□□□□ -2.31
LRRC28Q86X40 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LRRC28Q86X40 Y_RNA.122-201ENST00000363331 96 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNY4P34-201ENST00000364779 95 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 Y_RNA.355-201ENST00000365462 98 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNU4-48P-201ENST00000365559 182 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 Y_RNA.504-201ENST00000384481 104 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNU6-1065P-201ENST00000384513 106 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNU6-297P-201ENST00000384636 107 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 MIR1283-1-201ENST00000408494 87 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNU6-248P-201ENST00000410720 107 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC004866.1-201ENST00000411748 78 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 SNX2P2-201ENST00000424553 323 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 HMGN2P34-201ENST00000437647 269 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC091435.1-201ENST00000505442 584 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNA5SP503-201ENST00000517047 117 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC006566.1-201ENST00000608943 513 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.64□□□□□ -2.31
LRRC28Q86X40 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.64□□□□□ -2.31
LRRC28Q86X40 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC009541.1-201ENST00000438279 2662 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 SNORA25-201ENST00000384384 134 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 SNORA12.1-201ENST00000390873 148 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 MIR208B-201ENST00000401172 77 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 RPL31P35-201ENST00000431058 377 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 AL031274.1-201ENST00000450334 232 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.63□□□□□ -2.31
LRRC28Q86X40 SCARNA18-201ENST00000459004 134 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 RPS29P27-201ENST00000463711 170 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AK3P2-201ENST00000507976 429 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC106038.2-201ENST00000520706 568 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC016256.1-201ENST00000547971 354 ntBASIC0.63□□□□□ -2.31
LRRC28Q86X40 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms