Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MIR4659A-201ENST00000580269 81 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AC023043.3-201ENST00000593113 385 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 RPL12P50-201ENST00000603116 116 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX6-1P78426 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX6-1P78426 MTND5P35-201ENST00000557537 1720 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.81□□□□□ -1.96
NKX6-1P78426 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NKX6-1P78426 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
NKX6-1P78426 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NKX6-1P78426 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NKX6-1P78426 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NKX6-1P78426 RNU6-546P-201ENST00000383991 107 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 RNU6-926P-201ENST00000384075 107 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 Y_RNA.458-201ENST00000384240 102 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 MIR561-201ENST00000385216 97 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 AL033519.2-201ENST00000403958 392 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 AL358176.2-201ENST00000425769 204 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 RPEP5-201ENST00000441137 268 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 AC007395.1-201ENST00000451333 677 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 MRPS35P2-201ENST00000508242 191 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 AC091826.1-201ENST00000514065 313 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 RNU6-344P-201ENST00000516635 111 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 SNORA40.15-201ENST00000516884 107 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 SNORA48.11-201ENST00000517015 89 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NKX6-1P78426 AC008269.2-201ENST00000561915 1105 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 PRR13P7-201ENST00000605538 430 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 SNORD11B-201ENST00000607707 90 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NKX6-1P78426 AC240442.1-201ENST00000616055 283 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 AC010205.1-201ENST00000616668 449 ntBASIC2.8□□□□□ -1.96
NKX6-1P78426 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.8□□□□□ -1.96
NKX6-1P78426 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
NKX6-1P78426 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX6-1P78426 RNU6-1309P-201ENST00000363305 108 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 Y_RNA.176-201ENST00000363815 109 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 Y_RNA.210-201ENST00000364161 110 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 RNU6-1105P-201ENST00000384774 107 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 MRPL35P1-201ENST00000404272 572 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 RNU2-32P-201ENST00000411193 191 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 AC003685.2-201ENST00000422795 395 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX6-1P78426 AC107083.1-201ENST00000439643 279 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 UQCRBP2-201ENST00000447827 297 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 RN7SL863P-201ENST00000462370 296 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 MTATP8P1-201ENST00000467115 207 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.79□□□□□ -1.96
NKX6-1P78426 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX6-1P78426 AC067942.3-201ENST00000512025 362 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 RNU6-1143P-201ENST00000516125 104 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX6-1P78426 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 AC090616.3-201ENST00000582184 217 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 MZT1P2-201ENST00000604387 248 ntBASIC2.79□□□□□ -1.96
NKX6-1P78426 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX6-1P78426 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.78□□□□□ -1.96
NKX6-1P78426 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
NKX6-1P78426 Y_RNA.149-201ENST00000363558 117 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 Y_RNA.276-201ENST00000364732 109 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 RNU6-234P-201ENST00000365229 104 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 RNU6-611P-201ENST00000384276 104 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 RNU6-1026P-201ENST00000384465 108 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NKX6-1P78426 AL031121.1-201ENST00000406553 254 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 MTND3P2-201ENST00000438452 342 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX6-1P78426 IFNA11P-201ENST00000446352 526 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX6-1P78426 HMGN1P10-201ENST00000474557 553 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 AC091179.3-201ENST00000474761 144 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 AC074133.1-201ENST00000515696 183 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 RNU6-397P-201ENST00000516226 104 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 RNU6-635P-201ENST00000516651 102 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
NKX6-1P78426 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
NKX6-1P78426 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NKX6-1P78426 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NKX6-1P78426 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.78□□□□□ -1.96
NKX6-1P78426 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX6-1P78426 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NKX6-1P78426 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 RNU6-727P-201ENST00000363592 107 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 SNORD56.5-201ENST00000364281 72 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 RNA5SP126-201ENST00000365092 109 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 RPL21P3-201ENST00000395517 478 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 CST9LP2-201ENST00000437612 320 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 AC010655.3-201ENST00000478818 450 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 MIR449C-201ENST00000516047 92 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 RNU6-1098P-201ENST00000516772 96 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.77□□□□□ -1.97
NKX6-1P78426 AC022616.8-201ENST00000533569 253 ntBASIC2.77□□□□□ -1.97
NKX6-1P78426 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.77□□□□□ -1.97
NKX6-1P78426 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.77□□□□□ -1.97
NKX6-1P78426 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms