Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 Y_RNA.508-201ENST00000384502 114 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 RNU6-876P-201ENST00000391295 104 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 EIF4EP2-201ENST00000422816 654 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 AC069439.1-201ENST00000494739 167 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.3□□□□□ -2.04
TM4SF1P30408 AC026470.2-201ENST00000561492 181 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TM4SF1P30408 CASC19-280ENST00000642102 1351 ntBASIC2.3□□□□□ -2.04
TM4SF1P30408 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TM4SF1P30408 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TM4SF1P30408 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
TM4SF1P30408 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TM4SF1P30408 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 SNORD115-3-201ENST00000363100 82 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 Y_RNA.99-201ENST00000363138 105 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 RNU6-438P-201ENST00000365561 103 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 RNU6-378P-201ENST00000384324 107 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 MTND3P8-201ENST00000412909 339 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 RPS26P42-201ENST00000413485 326 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 MTCO3P46-201ENST00000425787 232 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 RNU6-329P-201ENST00000459618 107 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 AC046134.1-201ENST00000514454 666 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.29□□□□□ -2.04
TM4SF1P30408 RPS3AP23-202ENST00000574601 686 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 MIR4273-201ENST00000582824 84 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 AC009994.1-201ENST00000606889 253 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.29□□□□□ -2.04
TM4SF1P30408 AC012640.5-201ENST00000623897 319 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.29□□□□□ -2.04
TM4SF1P30408 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TM4SF1P30408 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
TM4SF1P30408 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TM4SF1P30408 Y_RNA.160-201ENST00000363677 92 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 RNU6-767P-201ENST00000384132 107 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TM4SF1P30408 RNU2-48P-201ENST00000410694 191 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 RNU6-1148P-201ENST00000410992 104 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF1P30408 MTND1P17-201ENST00000448961 204 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 AC107399.1-201ENST00000451226 265 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF1P30408 snoU13.6-201ENST00000458785 104 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF1P30408 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF1P30408 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF1P30408 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF1P30408 MIR4742-201ENST00000581069 85 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.28□□□□□ -2.04
TM4SF1P30408 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.28□□□□□ -2.04
TM4SF1P30408 MIR6128-201ENST00000615528 109 ntBASIC2.28□□□□□ -2.04
TM4SF1P30408 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.28□□□□□ -2.05
TM4SF1P30408 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TM4SF1P30408 RNU5B-2P-201ENST00000363036 113 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 RNU4-9P-201ENST00000364951 139 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 RNU6-306P-201ENST00000384617 107 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 HMGN2P39-201ENST00000398005 273 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 RPL30P16-201ENST00000419341 429 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AC087477.1-201ENST00000465747 340 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.27□□□□□ -2.05
TM4SF1P30408 RPS23P5-201ENST00000495419 428 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 PRDX4P1-201ENST00000507189 574 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.27□□□□□ -2.05
TM4SF1P30408 AC093259.1-201ENST00000509755 300 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 MIR449C-201ENST00000516047 92 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 Y_RNA.682-201ENST00000516457 100 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 RNU6-1088P-201ENST00000516850 104 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.27□□□□□ -2.05
TM4SF1P30408 MRPS36P4-201ENST00000534436 298 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.27□□□□□ -2.05
TM4SF1P30408 DNAJC19P9-201ENST00000555084 351 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.27□□□□□ -2.05
TM4SF1P30408 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.27□□□□□ -2.05
TM4SF1P30408 AC130454.1-201ENST00000622948 401 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 SCARNA4-201ENST00000629045 128 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 MIR1248-201ENST00000629190 106 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 MTND5P9-201ENST00000503854 1755 ntBASIC2.27□□□□□ -2.05
TM4SF1P30408 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TM4SF1P30408 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.27□□□□□ -2.05
TM4SF1P30408 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TM4SF1P30408 Y_RNA.796-201ENST00000364268 102 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 RNU6-593P-201ENST00000364716 112 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 Y_RNA.799-201ENST00000364992 102 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.26□□□□□ -2.05
TM4SF1P30408 OR2AQ1P-201ENST00000451972 200 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 AL163540.1-201ENST00000485382 386 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.26□□□□□ -2.05
TM4SF1P30408 AC233702.2-202ENST00000562547 291 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 uc_338.5-201ENST00000611839 155 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
TM4SF1P30408 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms