Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC015813.4-201ENST00000610469 179 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 MIR3914-2-201ENST00000637339 95 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 AC093908.1-201ENST00000623125 8092 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 MIR448-201ENST00000362131 111 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 MIR372-201ENST00000362225 67 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-674P-201ENST00000363831 107 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.294-201ENST00000364916 102 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 PTMAP2-201ENST00000397627 327 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 MIR300-201ENST00000401138 83 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 RPL23AP54-201ENST00000495129 419 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-589P-201ENST00000516485 107 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 MIR3158-1-201ENST00000583596 81 ntBASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB11Q9Y5F2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AP003122.5-201ENST00000527668 3766 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.43-201ENST00000362670 111 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 MIR200C-201ENST00000384980 68 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 MIR93-201ENST00000385024 80 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 MIR29B2-201ENST00000385055 81 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 MIR513A2-201ENST00000385249 127 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.587-201ENST00000391210 103 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 RPL23AP48-201ENST00000406913 488 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AL135786.1-201ENST00000415892 214 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AC010469.1-201ENST00000463864 576 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 RPS29P19-201ENST00000479709 171 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AC006445.1-201ENST00000491925 405 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AC010598.1-201ENST00000510378 103 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-772P-201ENST00000516042 105 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 SNORA67.7-201ENST00000516664 135 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-197P-201ENST00000516680 100 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 MTND5P34-201ENST00000568888 325 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 AL021707.8-201ENST00000609428 183 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 MIR6875-201ENST00000617506 72 ntBASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PCDHB11Q9Y5F2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHB11Q9Y5F2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHB11Q9Y5F2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHB11Q9Y5F2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHB11Q9Y5F2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHB11Q9Y5F2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 RNU2-55P-201ENST00000411146 174 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AL356095.1-201ENST00000417217 199 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC097463.2-201ENST00000421074 142 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 EIF4EP4-201ENST00000424916 578 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC069285.2-201ENST00000440210 275 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 SNRPGP5-201ENST00000456003 220 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 SNORD65B-201ENST00000459126 73 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC025445.1-201ENST00000502728 300 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC099522.1-202ENST00000514718 367 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AC008739.2-201ENST00000597006 317 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 snoZ196.1-201ENST00000625269 89 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 U6.95-201ENST00000636931 70 ntBASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB11Q9Y5F2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 AL356292.1-201ENST00000283110 373 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 RNU6-978P-201ENST00000364371 103 ntBASIC4.07□□□□□ -1.76
PCDHB11Q9Y5F2 RNU4-41P-201ENST00000364426 143 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms