Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.5□□□□□ -2.01
PKP4Q99569 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.5□□□□□ -2.01
PKP4Q99569 Z98742.2-201ENST00000431564 187 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.5□□□□□ -2.01
PKP4Q99569 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 RNU7-169P-201ENST00000459456 61 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.5□□□□□ -2.01
PKP4Q99569 MRPS35P2-201ENST00000508242 191 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.5□□□□□ -2.01
PKP4Q99569 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
PKP4Q99569 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.5□□□□□ -2.01
PKP4Q99569 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 CKS1BP7-201ENST00000522230 235 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.5□□□□□ -2.01
PKP4Q99569 CR383656.8-201ENST00000549046 145 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AL161670.1-201ENST00000554348 137 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.5□□□□□ -2.01
PKP4Q99569 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.5□□□□□ -2.01
PKP4Q99569 AC006006.1-201ENST00000603082 144 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 7SK.7-201ENST00000603504 247 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AL021879.1-201ENST00000611756 288 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 U2.1-201ENST00000618978 145 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 MIR6852-201ENST00000621699 66 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AC007792.1-201ENST00000623023 402 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AC097372.5-201ENST00000623665 376 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 AC241585.2-209ENST00000638217 143 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PKP4Q99569 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PKP4Q99569 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.5□□□□□ -2.01
PKP4Q99569 AC009541.1-201ENST00000438279 2662 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 RNU6-238P-201ENST00000363313 106 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 Y_RNA.193-201ENST00000363979 102 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 SNORA63.7-201ENST00000365579 123 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 SNORD116-20-201ENST00000384529 92 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 MIR592-201ENST00000384959 97 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 SNORA69.1-201ENST00000390904 137 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 RNU6-1109P-201ENST00000391187 107 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKP4Q99569 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.49□□□□□ -2.01
PKP4Q99569 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.49□□□□□ -2.01
PKP4Q99569 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKP4Q99569 AL513124.1-201ENST00000450410 614 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 OR2AQ1P-201ENST00000451972 200 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 MTCO3P8-201ENST00000453691 755 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 MRPL42P6-201ENST00000486397 371 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 SRIP1-201ENST00000489235 288 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
PKP4Q99569 RNU6-911P-201ENST00000516523 104 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 Y_RNA.715-201ENST00000517082 110 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AC131281.1-201ENST00000522984 164 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AC104581.2-201ENST00000572227 430 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AC060766.3-201ENST00000591442 263 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.49□□□□□ -2.01
PKP4Q99569 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKP4Q99569 AC131280.1-202ENST00000624067 4211 ntBASIC2.49□□□□□ -2.01
PKP4Q99569 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 RNU6-702P-201ENST00000364982 107 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 Y_RNA.551-201ENST00000384661 102 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 MIR628-201ENST00000385229 95 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PKP4Q99569 SNORA12.2-201ENST00000391040 156 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 FTH1P15-201ENST00000406984 280 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 SNORA11.2-201ENST00000408318 127 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 Y_RNA.592-201ENST00000410274 109 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 AC114482.1-201ENST00000418010 247 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 AC243964.1-201ENST00000441814 261 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 AL731563.1-201ENST00000442202 214 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 AP000705.1-201ENST00000454567 350 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 UBE2DNL-203ENST00000474922 222 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.48□□□□□ -2.01
PKP4Q99569 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.48□□□□□ -2.01
PKP4Q99569 RNU7-175P-201ENST00000515915 61 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 AC091144.1-201ENST00000519573 138 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.48□□□□□ -2.01
PKP4Q99569 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
PKP4Q99569 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.48□□□□□ -2.01
PKP4Q99569 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
PKP4Q99569 AC243829.7-201ENST00000633081 225 ntBASIC2.48□□□□□ -2.01
PKP4Q99569 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PKP4Q99569 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PKP4Q99569 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PKP4Q99569 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PKP4Q99569 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PKP4Q99569 AC233981.2-201ENST00000611524 1614 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 RNU6-858P-201ENST00000362436 107 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 SNORD56.1-201ENST00000362913 68 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 RNU6-26P-201ENST00000383985 107 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 Y_RNA.556-201ENST00000384677 113 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 MIR190B-201ENST00000401119 79 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 CYCSP48-201ENST00000417124 323 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AC074117.2-201ENST00000417130 397 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 EIF1AXP1-201ENST00000419267 435 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 MTCO3P29-201ENST00000432119 779 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms