Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.16□□□□□ -2.06
CMTM3Q96MX0 MTND4P17-201ENST00000470444 350 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AL117351.2-201ENST00000513571 157 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.16□□□□□ -2.06
CMTM3Q96MX0 MIR3200-201ENST00000580767 85 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 AC130454.1-201ENST00000622948 401 ntBASIC2.16□□□□□ -2.06
CMTM3Q96MX0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CMTM3Q96MX0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CMTM3Q96MX0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.15□□□□□ -2.06
CMTM3Q96MX0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.15□□□□□ -2.06
CMTM3Q96MX0 ZNF658B-202ENST00000615961 3375 ntBASIC2.15□□□□□ -2.06
CMTM3Q96MX0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
CMTM3Q96MX0 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.142-201ENST00000363491 102 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 SNORD114-6-201ENST00000364393 72 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RNU1-112P-201ENST00000364401 164 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.405-201ENST00000383979 100 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RNU6-245P-201ENST00000384020 107 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.451-201ENST00000384200 100 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.524-201ENST00000384564 100 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.561-201ENST00000384694 100 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RNU6-541P-201ENST00000384709 110 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 SNORA75.4-201ENST00000391278 119 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AC096664.2-201ENST00000411843 406 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AC007395.1-201ENST00000451333 677 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AL109933.2-201ENST00000452651 260 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RNU1-131P-201ENST00000458943 161 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RPL7P42-201ENST00000481005 679 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AC027288.2-201ENST00000553028 243 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AL121579.1-201ENST00000555129 305 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AC016727.1-205ENST00000605437 569 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
CMTM3Q96MX0 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.07
CMTM3Q96MX0 RNU6-545P-201ENST00000362681 104 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 RNA5SP493-201ENST00000364115 91 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.404-201ENST00000383978 102 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.474-201ENST00000384341 102 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 MIR483-201ENST00000385070 76 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 RNU4-14P-201ENST00000410858 122 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC004866.1-201ENST00000411748 78 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 USMG5P1-201ENST00000425964 177 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 HMGN2P3-201ENST00000433603 273 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 RPL23AP83-201ENST00000434984 473 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 HMGN2P5-201ENST00000436882 273 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 MTND4P18-201ENST00000447010 465 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.14□□□□□ -2.07
CMTM3Q96MX0 RNA5SP384-201ENST00000516615 116 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC105029.1-201ENST00000520250 669 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC134698.4-201ENST00000523451 826 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC005899.2-201ENST00000584353 90 ntBASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.14□□□□□ -2.07
CMTM3Q96MX0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.14□□□□□ -2.07
CMTM3Q96MX0 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 MIR208A-201ENST00000362287 71 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 RNU6-23P-201ENST00000363283 107 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 Y_RNA.132-201ENST00000363421 102 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 SNORD114-30-201ENST00000364448 72 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 SNORA70.4-201ENST00000365509 134 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AC087499.2-201ENST00000432861 149 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 RNU6-307P-201ENST00000516743 106 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 RRN3P3-201ENST00000549207 578 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 MIR5701-3-201ENST00000578890 82 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 MIR548S-201ENST00000581352 82 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 MIR5701-1-201ENST00000585138 82 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AL109918.3-201ENST00000603072 338 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AC113139.1-201ENST00000605049 239 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AC100812.1-201ENST00000607622 580 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AC005014.2-201ENST00000607795 599 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 MIR5701-2-201ENST00000615634 82 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 AL590240.4-201ENST00000616908 390 ntBASIC2.13□□□□□ -2.07
CMTM3Q96MX0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
CMTM3Q96MX0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 RNY1P16-201ENST00000363063 111 ntBASIC2.12□□□□□ -2.07
CMTM3Q96MX0 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
CMTM3Q96MX0 RNU6-331P-201ENST00000384724 107 ntBASIC2.12□□□□□ -2.07
CMTM3Q96MX0 RNU6-159P-201ENST00000391080 106 ntBASIC2.12□□□□□ -2.07
CMTM3Q96MX0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CMTM3Q96MX0 AC096920.1-201ENST00000423991 241 ntBASIC2.12□□□□□ -2.07
CMTM3Q96MX0 AC139712.2-201ENST00000424302 339 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms