Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 CENPBD1P1-201ENST00000464061 469 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC008155.2-201ENST00000464337 397 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 COX6CP14-201ENST00000469580 174 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 RN7SL601P-201ENST00000471221 293 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC021205.2-201ENST00000480069 347 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC107393.1-201ENST00000512403 346 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC024405.2-202ENST00000532731 184 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC018448.1-201ENST00000552843 316 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC105137.2-201ENST00000569073 466 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC022441.3-201ENST00000605737 136 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 RNU6-91P-201ENST00000607774 107 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC069200.1-201ENST00000609511 323 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 U6.105-201ENST00000637379 88 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.92□□□□□ -1.94
CPEB3Q8NE35 AC010889.1-201ENST00000566193 2666 ntBASIC2.92□□□□□ -1.94
CPEB3Q8NE35 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Z83843.1-201ENST00000604070 3685 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 SNORA63.1-201ENST00000362493 131 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 RNU6-1010P-201ENST00000362757 107 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.82-201ENST00000363000 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.92-201ENST00000363043 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.235-201ENST00000364412 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.306-201ENST00000365015 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.312-201ENST00000365089 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.322-201ENST00000365151 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.331-201ENST00000365267 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.383-201ENST00000383855 97 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 RNU6-245P-201ENST00000384020 107 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 MIR208B-201ENST00000401172 77 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 ELOCP21-201ENST00000412558 336 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 UQCRBP2-201ENST00000447827 297 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AL031183.1-201ENST00000457667 207 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.650-201ENST00000459002 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 RNU6-625P-201ENST00000459412 107 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AC091179.3-201ENST00000474761 144 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AC074133.1-201ENST00000515696 183 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.777-201ENST00000516982 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 RNU6-711P-201ENST00000517255 106 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 CYCSP23-201ENST00000519781 313 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AP002392.1-201ENST00000537692 208 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AL137100.2-201ENST00000555786 315 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 RPL21P9-201ENST00000556149 474 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.771-201ENST00000598668 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AL356575.1-201ENST00000603008 283 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AL034555.1-201ENST00000604816 211 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AC107294.3-201ENST00000609211 526 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 AC006001.4-201ENST00000622243 395 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 Y_RNA.789-201ENST00000622480 102 ntBASIC2.91□□□□□ -1.94
CPEB3Q8NE35 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.9□□□□□ -1.94
CPEB3Q8NE35 SNORD46.1-201ENST00000364139 104 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNU1-33P-201ENST00000364249 162 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNU6-805P-201ENST00000365643 106 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 AP002088.1-201ENST00000382740 395 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNU6-514P-201ENST00000384208 107 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNU6-793P-201ENST00000384233 104 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNU6-378P-201ENST00000384324 107 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNU6-750P-201ENST00000390946 107 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 CBX3P9-201ENST00000402326 552 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RNA5SP201-201ENST00000410316 124 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RPL23AP36-201ENST00000413895 458 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RAB28P5-201ENST00000427490 651 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 POLR2KP2-201ENST00000438155 177 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.9□□□□□ -1.95
CPEB3Q8NE35 snoU13.14-201ENST00000459372 104 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 RN7SL442P-201ENST00000473804 320 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 SNORA27.4-201ENST00000516650 95 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.9□□□□□ -1.95
CPEB3Q8NE35 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.9□□□□□ -1.95
CPEB3Q8NE35 Z83818.1-201ENST00000603584 150 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 AL162713.1-201ENST00000604480 262 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 MIR7975-201ENST00000619350 68 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.9□□□□□ -1.95
CPEB3Q8NE35 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CPEB3Q8NE35 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
CPEB3Q8NE35 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPEB3Q8NE35 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPEB3Q8NE35 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPEB3Q8NE35 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
CPEB3Q8NE35 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPEB3Q8NE35 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPEB3Q8NE35 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPEB3Q8NE35 RNU1-70P-201ENST00000362618 164 ntBASIC2.89□□□□□ -1.95
CPEB3Q8NE35 Y_RNA.101-201ENST00000363154 102 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 234.8 ms