Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 snoU13.27-201ENST00000459278 104 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU7-14P-201ENST00000459331 62 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC079382.1-201ENST00000493346 557 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC008628.2-201ENST00000502605 298 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC016632.1-201ENST00000503994 196 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 RNU6-1129P-201ENST00000515964 104 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.69□□□□□ -2.3
LRRC28Q86X40 AL442163.3-201ENST00000554110 156 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AGGF1P4-201ENST00000568249 801 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AP005136.1-201ENST00000579765 429 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC107304.1-201ENST00000604229 296 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AL365434.2-201ENST00000607979 234 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AL133173.2-201ENST00000614270 90 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC008147.4-201ENST00000617570 1204 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 MIR6788-201ENST00000618842 66 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AC009509.4-201ENST00000619202 509 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 MIR338-201ENST00000636369 67 ntBASIC0.69□□□□□ -2.3
LRRC28Q86X40 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.69□□□□□ -2.3
LRRC28Q86X40 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
LRRC28Q86X40 RNU6-1287P-201ENST00000362914 107 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 SNORA4.2-201ENST00000365313 147 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 RNU6-1029P-201ENST00000384109 107 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 Y_RNA.480-201ENST00000384364 102 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 RNU6-1060P-201ENST00000384664 107 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 MIR1-2-201ENST00000384961 85 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 EBAG9P1-201ENST00000418955 543 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AC011233.1-201ENST00000422812 283 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 USP9YP14-201ENST00000430663 563 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.68□□□□□ -2.3
LRRC28Q86X40 GPR143P-201ENST00000434155 205 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 MTND2P39-201ENST00000457230 764 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 SNRPGP7-201ENST00000469016 106 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 RNA5SP220-201ENST00000516298 104 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 Y_RNA.673-201ENST00000516306 88 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 RNA5SP384-201ENST00000516615 116 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 RNU6-165P-201ENST00000517170 99 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
LRRC28Q86X40 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.68□□□□□ -2.3
LRRC28Q86X40 AC103996.1-201ENST00000555468 102 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AL137100.2-201ENST00000555786 315 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 MIR4703-201ENST00000577728 79 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 SNORA4-201ENST00000584302 138 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 MIR548AB-201ENST00000584917 84 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AL078603.1-201ENST00000603824 313 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 MZT1P2-201ENST00000604387 248 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 Z99289.3-201ENST00000605586 594 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AL136370.1-201ENST00000608166 691 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AC126177.8-201ENST00000618339 1015 ntBASIC0.68□□□□□ -2.3
LRRC28Q86X40 AC018630.2-201ENST00000534866 2403 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU6-1097P-201ENST00000363586 107 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 SNORA33-201ENST00000363664 130 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU4-56P-201ENST00000364700 142 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU6-827P-201ENST00000365553 106 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU2-64P-201ENST00000411315 191 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 MTCO3P29-201ENST00000432119 779 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC002486.1-201ENST00000435098 391 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU7-182P-201ENST00000459009 62 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 AL163195.1-201ENST00000496941 348 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC011406.1-201ENST00000512440 370 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU6-1041P-201ENST00000516254 102 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 RNU5F-4P-201ENST00000516581 114 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC011604.1-201ENST00000545978 196 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 MIR3664-201ENST00000579074 99 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC091805.2-201ENST00000603848 235 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC092354.1-201ENST00000606057 376 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC002044.1-201ENST00000606707 158 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.67□□□□□ -2.3
LRRC28Q86X40 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
LRRC28Q86X40 BX322639.1-202ENST00000423987 2213 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 RNU6-266P-201ENST00000364225 107 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 Y_RNA.399-201ENST00000383955 105 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 RNY1P14-201ENST00000384426 108 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 RNU6-393P-201ENST00000384475 107 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
LRRC28Q86X40 RNU6-195P-201ENST00000411352 109 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 AC013410.2-201ENST00000422627 201 ntBASIC0.66□□□□□ -2.3
LRRC28Q86X40 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.66□□□□□ -2.3
LRRC28Q86X40 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms