Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC244505.4-201ENST00000434905 287 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AL445687.1-201ENST00000439946 251 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AC004386.2-201ENST00000441858 148 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX6-1P78426 SSXP5-201ENST00000443473 287 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 FCF1P4-201ENST00000448326 183 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AC109925.1-201ENST00000478069 331 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.84□□□□□ -1.95
NKX6-1P78426 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RNU2-44P-201ENST00000516795 194 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 RN7SKP282-201ENST00000516824 299 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AC034114.1-201ENST00000520293 285 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AP002404.1-201ENST00000532005 451 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.84□□□□□ -1.95
NKX6-1P78426 AC125232.2-201ENST00000592457 143 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AL021879.1-201ENST00000611756 288 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 AL137790.1-201ENST00000634283 177 ntBASIC2.84□□□□□ -1.95
NKX6-1P78426 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.96
NKX6-1P78426 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.84□□□□□ -1.96
NKX6-1P78426 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
NKX6-1P78426 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX6-1P78426 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 RNU1-62P-201ENST00000362599 164 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 SNORA18.2-201ENST00000383865 132 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 RNU6-1001P-201ENST00000411265 100 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX6-1P78426 RPS23P5-201ENST00000495419 428 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX6-1P78426 Y_RNA.683-201ENST00000516508 93 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 MIR2276-201ENST00000516886 89 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX6-1P78426 AC131281.1-201ENST00000522984 164 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX6-1P78426 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX6-1P78426 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
NKX6-1P78426 AL355297.2-201ENST00000604792 129 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 Y_RNA.772-201ENST00000606692 102 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 AC093732.2-201ENST00000607950 274 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 AC004832.5-201ENST00000608677 401 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 U6.92-201ENST00000636464 89 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 AL355596.1-201ENST00000565399 3996 ntBASIC2.83□□□□□ -1.96
NKX6-1P78426 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX6-1P78426 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NKX6-1P78426 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NKX6-1P78426 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX6-1P78426 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NKX6-1P78426 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NKX6-1P78426 RNA5SP361-201ENST00000362686 118 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 Y_RNA.153-201ENST00000363615 91 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 RNU6-318P-201ENST00000384283 103 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 MIR329-1-201ENST00000385028 80 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AL356057.3-201ENST00000402607 340 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 SNORD12B-201ENST00000410433 91 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 RNA5SP229-201ENST00000410809 99 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.82□□□□□ -1.96
NKX6-1P78426 Z82209.1-201ENST00000422141 2135 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AC010095.1-201ENST00000443543 144 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.82□□□□□ -1.96
NKX6-1P78426 RNU5F-4P-201ENST00000516581 114 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AC104027.1-201ENST00000521887 300 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AC018630.3-201ENST00000542637 96 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 AC006023.1-201ENST00000603944 259 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 uc_338.1-201ENST00000612113 180 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX6-1P78426 FAM35CP-201ENST00000554755 2470 ntBASIC2.82□□□□□ -1.96
NKX6-1P78426 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NKX6-1P78426 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX6-1P78426 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX6-1P78426 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX6-1P78426 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX6-1P78426 RNU6-944P-201ENST00000364023 107 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 SNORA51.4-201ENST00000364993 124 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 Y_RNA.439-201ENST00000384119 94 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 RNU6-1145P-201ENST00000384246 107 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 SNORA44-201ENST00000384584 132 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 MIR95-201ENST00000385072 81 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 RN7SKP58-201ENST00000411010 305 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX6-1P78426 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX6-1P78426 AL353705.1-201ENST00000433468 480 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AC073910.1-201ENST00000445047 438 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AC009237.7-201ENST00000447357 229 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX6-1P78426 PCNPP5-201ENST00000452246 481 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AC010469.2-201ENST00000496412 480 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.81□□□□□ -1.96
NKX6-1P78426 RNU6-1046P-201ENST00000516538 107 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 RNU6-1012P-201ENST00000516606 109 ntBASIC2.81□□□□□ -1.96
NKX6-1P78426 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.81□□□□□ -1.96
NKX6-1P78426 AL117187.1-201ENST00000555482 181 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms