Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MIR5696-201ENST00000578474 85 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 AC009229.3-201ENST00000608056 282 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 AC005520.5-201ENST00000613926 164 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 MIR6852-201ENST00000621699 66 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 AL359757.2-201ENST00000624309 274 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 SCARNA4-201ENST00000629045 128 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.35□□□□□ -2.03
CLIC4Q9Y696 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLIC4Q9Y696 ZNF299P-201ENST00000406845 1804 ntBASIC2.35□□□□□ -2.03
CLIC4Q9Y696 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 RNU4-9P-201ENST00000364951 139 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 Y_RNA.490-201ENST00000384413 102 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 SNORA46.1-201ENST00000391069 153 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 RPS26P42-201ENST00000413485 326 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC243428.1-201ENST00000421099 264 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AL358453.1-201ENST00000422522 250 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 CBX3P7-201ENST00000532876 502 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC018630.3-201ENST00000542637 96 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AL355375.2-201ENST00000574825 175 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC005899.2-201ENST00000584353 90 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 7SK.7-201ENST00000603504 247 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 SNRPGP19-201ENST00000603826 189 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 Y_RNA.783-201ENST00000613546 102 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIC4Q9Y696 AL669831.3-213ENST00000636676 183 ntBASIC2.34□□□□□ -2.03
CLIC4Q9Y696 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CLIC4Q9Y696 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLIC4Q9Y696 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLIC4Q9Y696 Y_RNA.2-201ENST00000362330 96 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 RNU6-1188P-201ENST00000363795 107 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 RNA5SP138-201ENST00000365098 114 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 MIR561-201ENST00000385216 97 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 SNORA75.4-201ENST00000391278 119 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 MIR208B-201ENST00000401172 77 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 Y_RNA.597-201ENST00000410463 100 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 SNRPEP8-201ENST00000442866 260 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AC087477.1-201ENST00000465747 340 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 RPL7P42-201ENST00000481005 679 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AF186996.7-201ENST00000492781 209 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIC4Q9Y696 MIR5690-201ENST00000583739 73 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AC002984.1-201ENST00000591692 448 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AL158827.2-201ENST00000602494 330 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 PCGEM1.1-201ENST00000613431 131 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AL691447.3-201ENST00000635020 330 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 AC112487.2-201ENST00000637950 304 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 Z82209.1-201ENST00000422141 2135 ntBASIC2.33□□□□□ -2.04
CLIC4Q9Y696 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 RNU6-1159P-201ENST00000362933 107 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 RNU1-23P-201ENST00000363361 144 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 U3.9-201ENST00000363823 204 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 RNU6-944P-201ENST00000364023 107 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 Y_RNA.473-201ENST00000384333 102 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 Y_RNA.533-201ENST00000384596 114 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 MTCYBP4-201ENST00000401524 249 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 Z98742.3-201ENST00000418637 326 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 snoU13.6-201ENST00000458785 104 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 RPL23AP75-201ENST00000491601 451 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 FRG2DP-202ENST00000566967 323 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 SCARNA15.3-201ENST00000626315 122 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 SCARNA4.1-201ENST00000628597 123 ntBASIC2.32□□□□□ -2.04
CLIC4Q9Y696 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLIC4Q9Y696 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CLIC4Q9Y696 RNU6-595P-201ENST00000363944 107 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 SNORD115-32-201ENST00000364079 82 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 RNU2-2P-201ENST00000410396 191 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.31□□□□□ -2.04
CLIC4Q9Y696 OR2AQ1P-201ENST00000451972 200 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 RN7SKP210-201ENST00000459176 261 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 RNU1-104P-201ENST00000517280 175 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 APOOP3-201ENST00000536787 586 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 RAB11AP2-201ENST00000545905 639 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
CLIC4Q9Y696 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms