Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL157831.1-201ENST00000426134 473 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 RBMY2UP-201ENST00000453474 324 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 RPL36AP48-201ENST00000485521 314 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 RPL36AP21-201ENST00000490372 323 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 AC090142.3-201ENST00000519012 385 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 AC022655.2-201ENST00000577280 318 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 AC002546.1-201ENST00000588041 2504 ntBASIC4.15□□□□□ -1.75
PCDHB11Q9Y5F2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 SNORA20B-201ENST00000384220 132 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.584-201ENST00000391090 114 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 SNORA79-201ENST00000408376 140 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 RNU2-37P-201ENST00000410695 177 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 AC245047.4-201ENST00000433189 144 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 AL358232.1-201ENST00000448030 501 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 SNRPGP8-201ENST00000454064 226 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP73-201ENST00000516744 108 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-1098P-201ENST00000516772 96 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.709-201ENST00000516952 92 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 AC006064.5-201ENST00000541782 248 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 MIR378D2-201ENST00000580636 98 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 AC006130.2-201ENST00000586202 326 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 uc_338.14-201ENST00000613162 166 ntBASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB11Q9Y5F2 SNORA27.1-201ENST00000362604 124 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RNU1-14P-201ENST00000362759 152 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-271P-201ENST00000363858 105 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP283-201ENST00000365604 119 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 AL117339.2-201ENST00000430475 180 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP49-201ENST00000516450 115 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RNU5F-4P-201ENST00000516581 114 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RNU7-116P-201ENST00000516940 62 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 Y_RNA.757-201ENST00000578934 114 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 POLR3GP1-201ENST00000594073 261 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 AL031274.2-201ENST00000599419 203 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 AL670379.2-201ENST00000604983 252 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 AC011266.1-201ENST00000624119 3569 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 AL353746.1-201ENST00000566293 6881 ntBASIC4.13□□□□□ -1.75
PCDHB11Q9Y5F2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-1298P-201ENST00000362456 101 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 SNORA25.7-201ENST00000364375 127 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP496-201ENST00000391240 109 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 AL512604.1-201ENST00000404812 257 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RN7SKP101-201ENST00000411376 320 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 CYCSP49-201ENST00000420810 319 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 AL162151.2-201ENST00000448875 158 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RPS26P55-201ENST00000471178 356 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RN7SL691P-201ENST00000494487 301 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 AC093331.1-201ENST00000521474 169 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB11Q9Y5F2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-235P-201ENST00000362644 107 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-755P-201ENST00000364400 103 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 MIR670-201ENST00000390142 98 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 MIR1283-1-201ENST00000408494 87 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 MIR1179-201ENST00000408703 91 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP38-201ENST00000410750 119 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RPL23AP46-201ENST00000438548 490 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 AL357134.1-201ENST00000445848 426 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNU6-437P-201ENST00000459408 95 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNU7-57P-201ENST00000459540 60 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNA5SP519-201ENST00000516480 119 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 RNU1-45P-201ENST00000517191 141 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 AC005972.2-201ENST00000604690 348 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 MIR432-201ENST00000606207 94 ntBASIC4.11□□□□□ -1.75
PCDHB11Q9Y5F2 AC093732.2-201ENST00000607950 274 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 368.8 ms