Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
PKP4Q99569 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
PKP4Q99569 MIR4513-201ENST00000581077 86 ntBASIC2.54□□□□□ -2
PKP4Q99569 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
PKP4Q99569 AC124312.5-201ENST00000604451 268 ntBASIC2.54□□□□□ -2
PKP4Q99569 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.54□□□□□ -2
PKP4Q99569 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PKP4Q99569 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
PKP4Q99569 RNU6-942P-201ENST00000363002 107 ntBASIC2.53□□□□□ -2
PKP4Q99569 RNU6-527P-201ENST00000363425 104 ntBASIC2.53□□□□□ -2
PKP4Q99569 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
PKP4Q99569 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
PKP4Q99569 Y_RNA.452-201ENST00000384202 108 ntBASIC2.53□□□□□ -2
PKP4Q99569 Y_RNA.500-201ENST00000384466 111 ntBASIC2.53□□□□□ -2
PKP4Q99569 MIR1302-3-201ENST00000408128 138 ntBASIC2.53□□□□□ -2
PKP4Q99569 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PKP4Q99569 AC007098.1-201ENST00000420122 367 ntBASIC2.53□□□□□ -2
PKP4Q99569 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.53□□□□□ -2
PKP4Q99569 RPL30P4-201ENST00000429309 333 ntBASIC2.53□□□□□ -2
PKP4Q99569 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.53□□□□□ -2
PKP4Q99569 CHEK2P4-201ENST00000450340 246 ntBASIC2.53□□□□□ -2
PKP4Q99569 AC079354.2-201ENST00000453523 154 ntBASIC2.53□□□□□ -2
PKP4Q99569 U8.20-201ENST00000459445 131 ntBASIC2.53□□□□□ -2
PKP4Q99569 RPL30P10-201ENST00000488148 337 ntBASIC2.53□□□□□ -2
PKP4Q99569 RPL23AP49-201ENST00000492925 468 ntBASIC2.53□□□□□ -2
PKP4Q99569 AC093852.1-201ENST00000503587 266 ntBASIC2.53□□□□□ -2
PKP4Q99569 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
PKP4Q99569 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.53□□□□□ -2
PKP4Q99569 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.53□□□□□ -2
PKP4Q99569 AC004817.2-201ENST00000561794 651 ntBASIC2.53□□□□□ -2
PKP4Q99569 MIR5188-201ENST00000583467 113 ntBASIC2.53□□□□□ -2
PKP4Q99569 MIR3149-201ENST00000584629 83 ntBASIC2.53□□□□□ -2
PKP4Q99569 Z98751.3-201ENST00000604447 521 ntBASIC2.53□□□□□ -2
PKP4Q99569 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.53□□□□□ -2
PKP4Q99569 MIR1244-1-201ENST00000612829 85 ntBASIC2.53□□□□□ -2
PKP4Q99569 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.53□□□□□ -2
PKP4Q99569 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
PKP4Q99569 MIR1244-3-201ENST00000635744 85 ntBASIC2.53□□□□□ -2
PKP4Q99569 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
PKP4Q99569 MIR1244-2-201ENST00000636449 85 ntBASIC2.53□□□□□ -2
PKP4Q99569 MIR1244-4-202ENST00000636813 85 ntBASIC2.53□□□□□ -2
PKP4Q99569 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.53□□□□□ -2
PKP4Q99569 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PKP4Q99569 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 Y_RNA.152-201ENST00000363578 100 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 RNU6-450P-201ENST00000364654 107 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 Y_RNA.401-201ENST00000383965 117 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 BTF3L4P2-201ENST00000392798 346 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AP000275.1-201ENST00000411943 390 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AC003685.2-201ENST00000422795 395 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PKP4Q99569 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AC092423.1-201ENST00000430165 186 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 ARL5AP4-201ENST00000430731 512 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AL591043.1-201ENST00000432461 424 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.52□□□□□ -2.01
PKP4Q99569 RN7SKP210-201ENST00000459176 261 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.52□□□□□ -2.01
PKP4Q99569 VN1R91P-201ENST00000594377 169 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AL355297.3-201ENST00000604082 446 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 RNU6-91P-201ENST00000607774 107 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AC010205.1-201ENST00000616668 449 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AC138305.3-201ENST00000624988 240 ntBASIC2.52□□□□□ -2.01
PKP4Q99569 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PKP4Q99569 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PKP4Q99569 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PKP4Q99569 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.51□□□□□ -2.01
PKP4Q99569 ZNF72P-201ENST00000425869 1908 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 Y_RNA.123-201ENST00000363338 102 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 RNY3P11-201ENST00000364153 102 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 RNU6-1280P-201ENST00000365211 107 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 RNU1-100P-201ENST00000365255 165 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 Y_RNA.574-201ENST00000384766 95 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PKP4Q99569 MTCYBP2-201ENST00000407745 171 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 MIR1252-201ENST00000408861 65 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AC004383.1-201ENST00000438135 289 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AC010655.3-201ENST00000478818 450 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.51□□□□□ -2.01
PKP4Q99569 RNU6-581P-201ENST00000516214 105 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 RNU6-635P-201ENST00000516651 102 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 ACA59.2-201ENST00000517061 156 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AC040926.1-201ENST00000530195 238 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AL590705.4-201ENST00000532209 134 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AC006600.1-201ENST00000572529 153 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.51□□□□□ -2.01
PKP4Q99569 U4.1-201ENST00000620349 87 ntBASIC2.51□□□□□ -2.01
PKP4Q99569 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PKP4Q99569 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.5□□□□□ -2.01
PKP4Q99569 Y_RNA.106-201ENST00000363189 100 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 Y_RNA.526-201ENST00000384572 110 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 MIR218-1-201ENST00000384999 110 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 MIR524-201ENST00000385242 87 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 RNA5SP494-201ENST00000410653 129 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 RNU6-1245P-201ENST00000411130 106 ntBASIC2.5□□□□□ -2.01
PKP4Q99569 MTCO3P19-201ENST00000415864 321 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms